RNA–Protein interactions for RNA: ENST00000522883.1

CDK16-218, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-218ENST00000522883 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
CDK16-218ENST00000522883 TMX2Q9Y320 296 aa16.4■□□□□ 0.22
CDK16-218ENST00000522883 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
CDK16-218ENST00000522883 RXRAP19793 462 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 OSBPP22059 807 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 SP3Q02447 781 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 RPAP3Q9H6T3 665 aaPredicted RBP16.39■□□□□ 0.21
CDK16-218ENST00000522883 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
CDK16-218ENST00000522883 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 RLFQ13129 1914 aa16.39■□□□□ 0.21
CDK16-218ENST00000522883 PEX10O60683 326 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 PARP1P09874 1014 aaKnown RBP16.38■□□□□ 0.21
CDK16-218ENST00000522883 GNAQP50148 359 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 GRM4Q14833 912 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 SPRYD3Q8NCJ5 442 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
CDK16-218ENST00000522883 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
CDK16-218ENST00000522883 SMC3Q9UQE7 1217 aa16.38■□□□□ 0.21
CDK16-218ENST00000522883 COL11A1P12107 1806 aaPredicted RBP16.38■□□□□ 0.21
CDK16-218ENST00000522883 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 CDC27P30260 824 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 HOXA7P31268 230 aaPredicted RBP16.37■□□□□ 0.21
CDK16-218ENST00000522883 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
CDK16-218ENST00000522883 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
CDK16-218ENST00000522883 CAP1Q01518 475 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
CDK16-218ENST00000522883 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
CDK16-218ENST00000522883 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 TANGO6Q9C0B7 1094 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
CDK16-218ENST00000522883 F5H6K3 240 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 PDHBP11177 359 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 BCRP11274 1271 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 HERVK_113P62684 666 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 KLRC3Q07444 240 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
CDK16-218ENST00000522883 SLFN13Q68D06 897 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
CDK16-218ENST00000522883 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 FAM217BQ9NTX9 383 aaPredicted RBP16.36■□□□□ 0.21
CDK16-218ENST00000522883 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
CDK16-218ENST00000522883 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
CDK16-218ENST00000522883 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 IFNAR1P17181 557 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 FAM83BQ5T0W9 1011 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 CTU1Q7Z7A3 348 aaKnown RBP16.35■□□□□ 0.21
CDK16-218ENST00000522883 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
CDK16-218ENST00000522883 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
CDK16-218ENST00000522883 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 CTDNEP1O95476 244 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 NDUFB10O96000 172 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 SLC1A4P43007 532 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 LACTBP83111 547 aaPredicted RBP16.34■□□□□ 0.21
CDK16-218ENST00000522883 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
CDK16-218ENST00000522883 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
CDK16-218ENST00000522883 TNS4Q8IZW8 715 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 LPAR1Q92633 364 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
CDK16-218ENST00000522883 TRIM17Q9Y577 477 aa16.34■□□□□ 0.21
CDK16-218ENST00000522883 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
CDK16-218ENST00000522883 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
CDK16-218ENST00000522883 JAK2O60674 1132 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 GJB2P29033 226 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 CTGFP29279 349 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 GCLCP48506 637 aaPredicted RBP16.33■□□□□ 0.2
CDK16-218ENST00000522883 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 KIF22Q14807 665 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 NTRK3Q16288 839 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 MCOLN1Q9GZU1 580 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
CDK16-218ENST00000522883 TXNRD2Q9NNW7 524 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms