RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 GINM1Q9NU53 330 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 PCDHB6Q9Y5E3 794 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
SPARC-205ENST00000522348 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
SPARC-205ENST00000522348 PSME4Q14997 1843 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 M0R2N6 131 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 ZNF202O95125 648 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 GDF11O95390 407 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 GH2P01242 217 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 ATP2B1P20020 1258 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 YY1P25490 414 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 NDUFA8P51970 172 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 RASSF7Q02833 373 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 TTC38Q5R3I4 469 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 PIK3AP1Q6ZUJ8 805 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 HOMER1Q86YM7 354 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 ELOA2Q8IYF1 753 aaPredicted RBP11.08□□□□□ -0.64
SPARC-205ENST00000522348 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 FUCA2Q9BTY2 467 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 GLT8D2Q9H1C3 349 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.64
SPARC-205ENST00000522348 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 FER1L6Q2WGJ9 1857 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 ZBTB5O15062 677 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 CAP2P40123 477 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 SYKP43405 635 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 PRELPP51888 382 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 TRAF1Q13077 416 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 RASA3Q14644 834 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 ZNF174Q15697 407 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
SPARC-205ENST00000522348 SHC4Q6S5L8 630 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 KCTD1Q719H9 257 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 CLEC10AQ8IUN9 316 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 HOOK2Q96ED9 719 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 CPVLQ9H3G5 476 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 SH2D4AQ9H788 454 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
SPARC-205ENST00000522348 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
SPARC-205ENST00000522348 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 RAD21O60216 631 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 BMP3P12645 472 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 PFKFB1P16118 471 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
SPARC-205ENST00000522348 JAG1P78504 1218 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 TYRO3Q06418 890 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 ORC2Q13416 577 aaPredicted RBP11.06□□□□□ -0.64
SPARC-205ENST00000522348 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
SPARC-205ENST00000522348 ARL6IP4Q66PJ3 421 aaKnown RBP11.06□□□□□ -0.64
SPARC-205ENST00000522348 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 TTBK2Q6IQ55 1244 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 KANK3Q6NY19 840 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 CKAP2LQ8IYA6 745 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 GPC2Q8N158 579 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 CCDC34Q96HJ3 373 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 CLIC6Q96NY7 704 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 HOOK1Q9UJC3 728 aaKnown RBP11.06□□□□□ -0.64
SPARC-205ENST00000522348 KCNH3Q9ULD8 1083 aa11.06□□□□□ -0.64
SPARC-205ENST00000522348 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 LAD1O00515 517 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 ASNSP08243 561 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 ATP2C1P98194 919 aaPredicted RBP11.05□□□□□ -0.64
SPARC-205ENST00000522348 PTGDRQ13258 359 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPARC-205ENST00000522348 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
SPARC-205ENST00000522348 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 TBC1D10BQ4KMP7 808 aaPredicted RBP11.05□□□□□ -0.64
SPARC-205ENST00000522348 MIGA2Q7L4E1 593 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 PYM1Q9BRP8 204 aaKnown RBP11.05□□□□□ -0.64
SPARC-205ENST00000522348 RIC8AQ9NPQ8 531 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
SPARC-205ENST00000522348 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 TMEM232C9JQI7 657 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 CTNND1O60716 968 aaKnown RBP11.04□□□□□ -0.64
SPARC-205ENST00000522348 PLA2G6O60733 806 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 NDUFB10O96000 172 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 MCM7P33993 719 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 SLC16A2P36021 539 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 ADCY7P51828 1080 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 CCDC173Q0VFZ6 552 aa11.04□□□□□ -0.64
SPARC-205ENST00000522348 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
SPARC-205ENST00000522348 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
SPARC-205ENST00000522348 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms