RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 XBP1P17861 261 aa24.7■■□□□ 1.54
R3HCC1-208ENST00000522012 PPATQ06203 517 aa24.7■■□□□ 1.54
R3HCC1-208ENST00000522012 ATAD5Q96QE3 1844 aa24.7■■□□□ 1.54
R3HCC1-208ENST00000522012 SPDYE5A6NIY4 337 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 WDR46O15213 610 aaKnown RBP24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 STAT2P52630 851 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 HMGCS2P54868 508 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 SYDE2Q5VT97 1194 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 KRT40Q6A162 431 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 SLC10A4Q96EP9 437 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 TMOD4Q9NZQ9 345 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 VPS54Q9P1Q0 977 aa24.69■■□□□ 1.54
R3HCC1-208ENST00000522012 MCTP1Q6DN14 999 aa24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 BTNL9Q6UXG8 535 aa24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 HEATR3Q7Z4Q2 680 aa24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 FERMT3Q86UX7 667 aa24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 RBM46Q8TBY0 533 aaKnown RBP24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 CHURC1Q8WUH1 139 aa24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 GPKOWQ92917 476 aaPredicted RBP eCLIP24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 TNPO1Q92973 898 aaKnown RBP24.68■■□□□ 1.54
R3HCC1-208ENST00000522012 UNCXA6NJT0 531 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 F13A1P00488 732 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 VCAM1P19320 739 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 SAMD1Q6SPF0 538 aaPredicted RBP24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 OPTNQ96CV9 577 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 FEM1BQ9UK73 627 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 KCNJ14Q9UNX9 436 aa24.67■■□□□ 1.54
R3HCC1-208ENST00000522012 CST9Q5W186 159 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 FAM160B2Q86V87 743 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 TANGO6Q9C0B7 1094 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 RPAP3Q9H6T3 665 aaPredicted RBP24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 PNMA6FA0A0J9YX94 578 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 IRF6O14896 467 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 WWC2Q6AWC2 1192 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 RGS22Q8NE09 1264 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 KIFC2Q96AC6 838 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 C12orf42Q96LP6 360 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 PRR12Q9ULL5 1215 aa24.66■■□□□ 1.54
R3HCC1-208ENST00000522012 ZBTB5O15062 677 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 PLA2G6O60733 806 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 SNAP25P60880 206 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 PPIL2Q13356 520 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 SH3D19Q5HYK7 790 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 MTMR8Q96EF0 704 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 FBXO28Q9NVF7 368 aa24.65■■□□□ 1.54
R3HCC1-208ENST00000522012 CXCL11O14625 94 aa24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 SAFBQ15424 915 aaKnown RBP eCLIP24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 CDC37Q16543 378 aaPredicted RBP24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 FOXD4L6Q3SYB3 417 aaPredicted RBP24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 FOXD4L3Q6VB84 417 aaPredicted RBP24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 SHISA4Q96DD7 197 aa24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 SH3GLB2Q9NR46 395 aa24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 BARHL2Q9NY43 387 aa24.64■■□□□ 1.53
R3HCC1-208ENST00000522012 STXBP3O00186 592 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 MMP1P03956 469 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 NLRP5P59047 1200 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 QRICH1Q2TAL8 776 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 SMC1BQ8NDV3 1235 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 PAPPA2Q9BXP8 1791 aa24.63■■□□□ 1.53
R3HCC1-208ENST00000522012 FSTL1Q12841 308 aa24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 RESTQ13127 1097 aa24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 GNL2Q13823 731 aaKnown RBP24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 SLF1Q9BQI6 1058 aa24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 PHF20Q9BVI0 1012 aa24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 ZSCAN16Q9H4T2 348 aaPredicted RBP24.62■■□□□ 1.53
R3HCC1-208ENST00000522012 PPP1R11O60927 126 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 FLOT1O75955 427 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 NAPAP54920 295 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 GADL1Q6ZQY3 521 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 PRPF38AQ8NAV1 312 aaKnown RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 COA7Q96BR5 231 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 KCNH4Q9UQ05 1017 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 ATP6V1DQ9Y5K8 247 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 OTOFQ9HC10 1997 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 A0A0G2JLL6 359 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 hCG_1984214I3L0E3 225 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 GJA5P36382 358 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 KIF23Q02241 960 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 TYW1BQ6NUM6 668 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 PRRT2Q7Z6L0 340 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 DIS3L2Q8IYB7 885 aaKnown RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 DNAJC5GQ8N7S2 189 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 ZNF713Q8N859 430 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 CCDC148Q8NFR7 591 aa24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 CCDC12Q8WUD4 166 aaPredicted RBP24.61■■□□□ 1.53
R3HCC1-208ENST00000522012 BRMS1Q9HCU9 246 aa24.6■■□□□ 1.53
R3HCC1-208ENST00000522012 PASKQ96RG2 1323 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 BTBD18B2RXH4 712 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 KIF28PB7ZC32 967 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L15C9J2P7 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L13C9JLJ4 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L11C9JVI0 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L18D6R9N7 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L22D6RA61 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L17D6RBQ6 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L19D6RCP7 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 USP17L20D6RJB6 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 CALML3P27482 149 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 KRT2P35908 639 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 HUNKP57058 714 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms