RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZNFX1Q9P2E3 1918 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-211ENST00000521700 TMEM232C9JQI7 657 aa21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 ZBED4O75132 1171 aa21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 CCND3P30281 292 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 MFSD14CQ5VZR4 134 aa21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 TEX13BQ9BXU2 312 aa21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 SLC38A10Q9HBR0 1119 aa21.11■□□□□ 0.97
TRAPPC9-211ENST00000521700 NEDD4P46934 1319 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 ATP2A1O14983 1001 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 FARP2O94887 1054 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 CYP2C19P33261 490 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 COPB2P35606 906 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 PRPF38BQ5VTL8 546 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 SNRNP48Q6IEG0 339 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 RCSD1Q6JBY9 416 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 KCTD1Q719H9 257 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 CPXCR1Q8N123 301 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 MMP19Q99542 508 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 TMEM47Q9BQJ4 181 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 CTNNA3Q9UI47 895 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 ISY1Q9ULR0 285 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 RIPK3Q9Y572 518 aa21.1■□□□□ 0.97
TRAPPC9-211ENST00000521700 LAMA4Q16363 1823 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 SLC34A2O95436 690 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 TOP1P11387 765 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 STAT2P52630 851 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 OLFML2BQ68BL8 750 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 CHURC1Q8WUH1 139 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 RUFY2Q8WXA3 655 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 ESR2Q92731 530 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 RAVER2Q9HCJ3 691 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 SLC5A4Q9NY91 659 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 MTMR7Q9Y216 660 aa21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 CTDP1Q9Y5B0 961 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC9-211ENST00000521700 RAD50Q92878 1312 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 PLA2G6O60733 806 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 SLC4A3P48751 1232 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 KCTD2Q14681 263 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 IMMTQ16891 758 aaKnown RBP21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 CENPQQ7L2Z9 268 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 FAM160B2Q86V87 743 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 TTC14Q96N46 770 aa21.08■□□□□ 0.97
TRAPPC9-211ENST00000521700 PGK2P07205 417 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 FDX1P10109 184 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 IKQ13123 557 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 LHX8Q68G74 356 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 TRPV1Q8NER1 839 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 DCAF4Q8WV16 495 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 MAML3Q96JK9 1138 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 ZKSCAN3Q9BRR0 538 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 OGDHLQ9ULD0 1010 aa21.07■□□□□ 0.96
TRAPPC9-211ENST00000521700 KDM4AO75164 1064 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 NT5C2P49902 561 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 OAZ1P54368 228 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 PTH1RQ03431 593 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 ZNF792Q3KQV3 632 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 SKAP1Q86WV1 359 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 ANKLE1Q8NAG6 615 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 PAWRQ96IZ0 340 aaKnown RBP21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 PRR12Q9ULL5 1215 aa21.06■□□□□ 0.96
TRAPPC9-211ENST00000521700 B4E1Z4 1266 aa21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 SGSM2O43147 1006 aa21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 MNX1P50219 401 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 CCDC96Q2M329 555 aa21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 DIS3LQ8TF46 1054 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 ZSWIM5Q9P217 1185 aa21.05■□□□□ 0.96
TRAPPC9-211ENST00000521700 ZNF536O15090 1300 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 CYBAP13498 195 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 CNGA1P29973 690 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 SNAP25P60880 206 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 PRAMEF19Q5SWL8 479 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 DGKHQ86XP1 1220 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 HTATIP2Q9BUP3 242 aa21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 DIS3Q9Y2L1 958 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-211ENST00000521700 PLXNA1Q9UIW2 1896 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 PDHBP11177 359 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 BTNL9Q6UXG8 535 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 NECAB2Q7Z6G3 386 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 CHST13Q8NET6 341 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 DPF3Q92784 378 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 DDX11Q96FC9 970 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 AGBL1Q96MI9 1066 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 KRT23Q9C075 422 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 GPCPD1Q9NPB8 672 aa21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 DDX20Q9UHI6 824 aaKnown RBP21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 FRMPD2Q68DX3 1309 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC9-211ENST00000521700 DNAJC25-GNG10A0A024R161 153 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 SLC16A2P36021 539 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 CCDC178Q5BJE1 867 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 ANKS1AQ92625 1134 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 ZSCAN10Q96SZ4 725 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 FBXO40Q9UH90 709 aa21.02■□□□□ 0.96
TRAPPC9-211ENST00000521700 CYP21A2P08686 494 aa21.01■□□□□ 0.95
TRAPPC9-211ENST00000521700 SNHG28P0DPA3 235 aa21.01■□□□□ 0.95
TRAPPC9-211ENST00000521700 CCDC174Q6PII3 467 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms