RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DIRC2Q96SL1 478 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 FOXP3Q9BZS1 431 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-209ENST00000521559 ZNF281Q9Y2X9 895 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 CCDC9Q9Y3X0 531 aaKnown RBP5.19□□□□□ -1.58
VPS13B-209ENST00000521559 MRC2Q9UBG0 1479 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 RBAK-RBAKDNI3L0D1 243 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 GSNP06396 782 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 TMEM253P0C7T8 217 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 BMP8BP34820 402 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 TRHRP34981 398 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-209ENST00000521559 RAP1GAPP47736 663 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 SNW1Q13573 536 aaKnown RBP5.18□□□□□ -1.58
VPS13B-209ENST00000521559 ANKRD39Q53RE8 183 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 CWF19L1Q69YN2 538 aaKnown RBP5.18□□□□□ -1.58
VPS13B-209ENST00000521559 SYDE1Q6ZW31 735 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-209ENST00000521559 METTL16Q86W50 562 aaKnown RBP5.18□□□□□ -1.58
VPS13B-209ENST00000521559 NT5DC4Q86YG4 428 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 RASGRP4Q8TDF6 673 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 GPRASP2Q96D09 838 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 MAP6Q96JE9 813 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 DSCC1Q9BVC3 393 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 RNF32Q9H0A6 362 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 C19orf44Q9H6X5 657 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 GFOD1Q9NXC2 390 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 TNFRSF10DQ9UBN6 386 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 GPR160Q9UJ42 338 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 PPT2Q9UMR5 302 aa5.18□□□□□ -1.58
VPS13B-209ENST00000521559 TSPAN15O95858 294 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 ACRP10323 421 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 SOX9P48436 509 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 EIF6P56537 245 aaKnown RBP5.17□□□□□ -1.58
VPS13B-209ENST00000521559 ZNF124Q15973 351 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 NOL9Q5SY16 702 aaKnown RBP5.17□□□□□ -1.58
VPS13B-209ENST00000521559 ANKLE2Q86XL3 938 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 RGS22Q8NE09 1264 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 INTS4Q96HW7 963 aaKnown RBP5.17□□□□□ -1.58
VPS13B-209ENST00000521559 FCRL2Q96LA5 508 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-209ENST00000521559 TOX2Q96NM4 488 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 SP110Q9HB58 689 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 GINM1Q9NU53 330 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 EFR3BQ9Y2G0 817 aa5.17□□□□□ -1.58
VPS13B-209ENST00000521559 YBX2Q9Y2T7 364 aaKnown RBP5.17□□□□□ -1.58
VPS13B-209ENST00000521559 ABCC8Q09428 1581 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 FAM86C2PA6NEL3 165 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 NRDCO43847 1150 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 NOP2P46087 812 aaKnown RBP5.16□□□□□ -1.58
VPS13B-209ENST00000521559 JAG1P78504 1218 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 HDLBPQ00341 1268 aaKnown RBP5.16□□□□□ -1.58
VPS13B-209ENST00000521559 TCEAL1Q15170 157 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 UNC5AQ6ZN44 842 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 CEP128Q6ZU80 1094 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 LSRQ86X29 649 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-209ENST00000521559 CPLX3Q8WVH0 158 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 SEC16BQ96JE7 1060 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 G6PC3Q9BUM1 346 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 SRRTQ9BXP5 876 aaKnown RBP5.16□□□□□ -1.58
VPS13B-209ENST00000521559 TGIF2Q9GZN2 237 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 CRTAC1Q9NQ79 661 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 PODXL2Q9NZ53 605 aa5.16□□□□□ -1.58
VPS13B-209ENST00000521559 URB2Q14146 1524 aaKnown RBP5.16□□□□□ -1.58
VPS13B-209ENST00000521559 CUX2O14529 1486 aa5.15□□□□□ -1.58
VPS13B-209ENST00000521559 A0A087WZG4 1122 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 WTIPA6NIX2 430 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 MEIS1O00470 390 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 PEX10O60683 326 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 FKTNO75072 461 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 ZNF205O95201 554 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 VAV1P15498 845 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 PDE6BP35913 854 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 GJA8P48165 433 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 GALNT18Q6P9A2 607 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 C19orf47Q8N9M1 422 aaKnown RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 ZSCAN18Q8TBC5 510 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 KCNN1Q92952 543 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 CDADC1Q9BWV3 514 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 CCSER2Q9H7U1 834 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 PHAXQ9H814 394 aaKnown RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 ZNF214Q9UL59 606 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 STRIP2Q9ULQ0 834 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 SF3B6Q9Y3B4 125 aaKnown RBP5.15□□□□□ -1.59
VPS13B-209ENST00000521559 FHOD1Q9Y613 1164 aa5.15□□□□□ -1.59
VPS13B-209ENST00000521559 WRNQ14191 1432 aaPredicted RBP eCLIP5.14□□□□□ -1.59
VPS13B-209ENST00000521559 WDR62O43379 1518 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 TOPBP1Q92547 1522 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 TMEM82A0PJX8 343 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 OR14I1A6ND48 311 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 TCAF2A6NFQ2 919 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 C9IYK1 514 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 PSPNO60542 156 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 USP2O75604 605 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-209ENST00000521559 ITGA4P13612 1032 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 GLDCP23378 1020 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 ARL4AP40617 200 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 GIPRP48546 466 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 RTP1P59025 263 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 OLFML2BQ68BL8 750 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 TMEM132EQ6IEE7 984 aa5.14□□□□□ -1.59
VPS13B-209ENST00000521559 CCDC81Q6ZN84 652 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms