RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TMOD4Q9NZQ9 345 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 LCHNA4D1U4 455 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 ZBBXA8MT70 800 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 ARVCFO00192 962 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 FRAT2O75474 233 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 ZNF865P0CJ78 1059 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 CCNA1P78396 465 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 LMBR1LQ6UX01 489 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 VPS37DQ86XT2 251 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 NUP133Q8WUM0 1156 aa9.11□□□□□ -0.95
CTNNA1-227ENST00000521387 ELP1O95163 1332 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 ASIC4Q96FT7 647 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 MAML3Q96JK9 1138 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 AS3MTQ9HBK9 375 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 CHMP3Q9Y3E7 222 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 IVNS1ABPQ9Y6Y0 642 aa9.1□□□□□ -0.95
CTNNA1-227ENST00000521387 MROH7Q68CQ1 1323 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 SYNRGQ9UMZ2 1314 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 MOXD2PA6NHM9 499 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 ZXDAP98168 799 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 NEXNQ0ZGT2 675 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 PICALMQ13492 652 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 COL19A1Q14993 1142 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 LBX2Q6XYB7 198 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 G2E3Q7L622 706 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 FRMD5Q7Z6J6 570 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 SCLYQ96I15 445 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 AGBL1Q96MI9 1066 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 NOC4LQ9BVI4 516 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 HIPK3Q9H422 1215 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 RCAN3Q9UKA8 241 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 MYO7AQ13402 2215 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 MAST4O15021 2626 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 ROBO3Q96MS0 1386 aa9.09□□□□□ -0.95
CTNNA1-227ENST00000521387 ZNF236Q9UL36 1845 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 RHBDL3P58872 404 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 CAVIN4Q5BKX8 364 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 CATSPERGQ6ZRH7 1159 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 HERC6Q8IVU3 1022 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 C8orf58Q8NAV2 365 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 SLC43A3Q8NBI5 491 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 WDR66Q8TBY9 1149 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 NKD2Q969F2 451 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 DLL3Q9NYJ7 618 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 NRBP1Q9UHY1 535 aa9.08□□□□□ -0.96
CTNNA1-227ENST00000521387 FRYLO94915 3013 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 STRNO43815 780 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 ASGR1P07306 291 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 LTBRP36941 435 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 RRP1P56182 461 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 PUM1Q14671 1186 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 CCDC57Q2TAC2 916 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 RPUSD2Q8IZ73 545 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 PHOSPHO2Q8TCD6 241 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 GLT1D1Q96MS3 346 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 ASPMQ8IZT6 3477 aa9.07□□□□□ -0.96
CTNNA1-227ENST00000521387 GRIN2DO15399 1336 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 A0A0U1RQG5 324 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 CTAGE5O15320 804 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 ADCY6O43306 1168 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 PDGFBP01127 241 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 ERCC3P19447 782 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 FGFR2P21802 821 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 CST5P28325 142 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 SMAD2Q15796 467 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 LRRC24Q50LG9 513 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 TAF7LQ5H9L4 462 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 TMCO2Q7Z6W1 182 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 C12orf42Q96LP6 360 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 SLC9A7Q96T83 725 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 DNAJC18Q9H819 358 aa9.06□□□□□ -0.96
CTNNA1-227ENST00000521387 RBAK-RBAKDNI3L0D1 243 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 APAF1O14727 1248 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 TLR3O15455 904 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 AKR1A1P14550 325 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 ERVK-21P61565 698 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms