RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 PTPREP23469 700 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 RGS2P41220 211 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 RAD21O60216 631 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 CYP2B6P20813 491 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 GJA8P48165 433 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 NT5C2P49902 561 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 MROH8Q9H579 483 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 TNRC18O15417 2968 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-209ENST00000521167 SGPL1O95470 568 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 SLC25A27O95847 323 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 NDUFB10O96000 172 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 HOXC6P09630 235 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 NOVP48745 357 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 GRB14Q14449 540 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 MFSD6Q6ZSS7 791 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 SLF1Q9BQI6 1058 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 FBXO28Q9NVF7 368 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 RPTORQ8N122 1335 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 CEP290O15078 2479 aa12.31□□□□□ -0.44
TRAPPC9-209ENST00000521167 ZNF236Q9UL36 1845 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 PLXNA1Q9UIW2 1896 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 VWA5AO00534 786 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 ZNF213O14771 459 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 FDX1P10109 184 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 ERCC3P19447 782 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 COPB2P35606 906 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 STAT3P40763 770 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 PLS1Q14651 629 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 TMEM132BQ14DG7 1078 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 ABRAQ8N0Z2 381 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 TRIB2Q92519 343 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 APBA2Q99767 749 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 PAK6Q9NQU5 681 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 IL17RBQ9NRM6 502 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
TRAPPC9-209ENST00000521167 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 PLA2G6O60733 806 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 ZBED4O75132 1171 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 BMP3P12645 472 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 GMCL1Q96IK5 515 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 TTC14Q96N46 770 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 SLC5A4Q9NY91 659 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 RAD50Q92878 1312 aa12.29□□□□□ -0.44
TRAPPC9-209ENST00000521167 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 CHMLP26374 656 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 HAND2P61296 217 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 CCDC178Q5BJE1 867 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 DPP9Q86TI2 863 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 DEFB118Q96PH6 123 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
TRAPPC9-209ENST00000521167 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms