RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 EZH1Q92800 747 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 CHRDQ9H2X0 955 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 PAK6Q9NQU5 681 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 TONSLQ96HA7 1378 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 BCORQ6W2J9 1755 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 ARFGEF2Q9Y6D5 1785 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 LOC100289279A0A1B0GTE1 492 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 FAM95CA0A1B0GW59 222 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 DRD2P14416 443 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 PHKG2P15735 406 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 CRKLP46109 303 aaKnown RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 CABP4P57796 275 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 EAPPQ56P03 285 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 USPL1Q5W0Q7 1092 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 C2CD4AQ8NCU7 369 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 SLC17A8Q8NDX2 589 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 SLC7A3Q8WY07 619 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 MKNK1Q9BUB5 465 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 OSBPL1AQ9BXW6 950 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 NRSN2Q9GZP1 204 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 GGNBP2Q9H3C7 697 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 BSDC1Q9NW68 430 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 RNF186Q9NXI6 227 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 PGAP2Q9UHJ9 254 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 HACL1Q9UJ83 578 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 ANGEL1Q9UNK9 670 aaKnown RBP5.5□□□□□ -1.53
VPS13B-208ENST00000521037 RTL1A6NKG5 1358 aa5.5□□□□□ -1.53
VPS13B-208ENST00000521037 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-208ENST00000521037 EVC2Q86UK5 1308 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 TRPM7Q96QT4 1865 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
VPS13B-208ENST00000521037 PAPLNO95428 1278 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 SERPINB2P05120 415 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 EPS15P42566 896 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 RRS1Q15050 365 aaKnown RBP5.49□□□□□ -1.53
VPS13B-208ENST00000521037 CTU1Q7Z7A3 348 aaKnown RBP5.49□□□□□ -1.53
VPS13B-208ENST00000521037 ZAR1Q86SH2 424 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 ATCAYQ86WG3 371 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 GIMAP7Q8NHV1 300 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 TAOK3Q9H2K8 898 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 SOX17Q9H6I2 414 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-208ENST00000521037 SAGE1Q9NXZ1 904 aa5.49□□□□□ -1.53
VPS13B-208ENST00000521037 TRIOBPQ9H2D6 2365 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 CYP26A1O43174 497 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 GRM1Q13255 1194 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
VPS13B-208ENST00000521037 ZNF438Q7Z4V0 828 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 PNMA8AQ86V59 439 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-208ENST00000521037 BSNDQ8WZ55 320 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 RAPGEF4Q8WZA2 1011 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 METTL22Q9BUU2 404 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-208ENST00000521037 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 TMOD3Q9NYL9 352 aa5.48□□□□□ -1.53
VPS13B-208ENST00000521037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-208ENST00000521037 FAM170BA6NMN3 283 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 SRGNP10124 158 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 CES1P23141 567 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 MFAP1P55081 439 aaKnown RBP5.47□□□□□ -1.53
VPS13B-208ENST00000521037 CAP1Q01518 475 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 SOX4Q06945 474 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-208ENST00000521037 NFKBIBQ15653 356 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 PRR5LQ6MZQ0 368 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 PRPF40BQ6NWY9 871 aaKnown RBP5.47□□□□□ -1.53
VPS13B-208ENST00000521037 PAOXQ6QHF9 649 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 TP53INP2Q8IXH6 220 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 CSRNP1Q96S65 589 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 CYP4F12Q9HCS2 524 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 ZNF277Q9NRM2 450 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-208ENST00000521037 NARFQ9UHQ1 456 aa5.47□□□□□ -1.53
VPS13B-208ENST00000521037 RBBP6Q7Z6E9 1792 aaKnown RBP5.47□□□□□ -1.53
VPS13B-208ENST00000521037 KLRG2A4D1S0 409 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-208ENST00000521037 FAM177BA6PVY3 158 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 H0YIN7 160 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 ESRRAP11474 423 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-208ENST00000521037 ARL4DP49703 201 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 IKBKEQ14164 716 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 SEZ6L2Q6UXD5 910 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 GPC2Q8N158 579 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 CLP1Q92989 425 aaKnown RBP5.46□□□□□ -1.54
VPS13B-208ENST00000521037 OSMRQ99650 979 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 BRIP1Q9BX63 1249 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 GLIS2Q9BZE0 524 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-208ENST00000521037 ZC3H7BQ9UGR2 993 aaKnown RBP5.46□□□□□ -1.54
VPS13B-208ENST00000521037 SEPT3Q9UH03 358 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 PAPPA2Q9BXP8 1791 aa5.46□□□□□ -1.54
VPS13B-208ENST00000521037 A6NHS1 94 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 CYP19A1P11511 503 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-208ENST00000521037 KIF23Q02241 960 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-208ENST00000521037 FKBP4Q02790 459 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS13B-208ENST00000521037 NOGQ13253 232 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 TMEM164Q5U3C3 297 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 SYNE4Q8N205 404 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 PMEPA1Q969W9 287 aa5.45□□□□□ -1.54
VPS13B-208ENST00000521037 TBC1D32Q96NH3 1257 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms