RNA–Protein interactions for RNA: ENST00000520986.5

DENND3-215, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-215	ENST00000520986	IK	Q13123	557 aa	Predicted RBP	27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	CREB3L3	Q68CJ9	461 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	RALYL	Q86SE5	291 aa	Known RBP	27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	NCAPG2	Q86XI2	1143 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	RIOX2	Q8IUF8	465 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	CHURC1	Q8WUH1	139 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	MROH8	Q9H579	483 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	SLC38A10	Q9HBR0	1119 aa		27.9	■■■□□ 2.06
DENND3-215	ENST00000520986	SLC15A5	A6NIM6	579 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	ZBED4	O75132	1171 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	STAT3	P40763	770 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	MLLT1	Q03111	559 aa	Predicted RBP	27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	GRB14	Q14449	540 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	SEC23A	Q15436	765 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	IVNS1ABP	Q9Y6Y0	642 aa		27.89	■■■□□ 2.06
DENND3-215	ENST00000520986	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.89	■■■□□ 2.05
DENND3-215	ENST00000520986	ZNF236	Q9UL36	1845 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	SLC25A27	O95847	323 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	MYC	P01106	439 aa	Predicted RBP	27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	SNHG28	P0DPA3	235 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	TTBK2	Q6IQ55	1244 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	PNMA1	Q8ND90	353 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	TEX13B	Q9BXU2	312 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	KAT14	Q9H8E8	782 aa		27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	BIN2	Q9UBW5	565 aa	Predicted RBP	27.88	■■■□□ 2.05
DENND3-215	ENST00000520986	ATP2A1	O14983	1001 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	XRCC5	P13010	732 aa	Known RBP	27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	RGS2	P41220	211 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	MAP2K5	Q13163	448 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	CPXCR1	Q8N123	301 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	RAVER2	Q9HCJ3	691 aa	Known RBP	27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	GPCPD1	Q9NPB8	672 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	PRR12	Q9ULL5	1215 aa		27.87	■■■□□ 2.05
DENND3-215	ENST00000520986	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	CENPF	P49454	3210 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	STRN	O43815	780 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	FDX1	P10109	184 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	ANTXR2	P58335	489 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	ZNF543	Q08ER8	600 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	MTFR1	Q15390	333 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	IFIT1B	Q5T764	474 aa	Known RBP	27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	SNRNP48	Q6IEG0	339 aa	Known RBP	27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	BTNL9	Q6UXG8	535 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	CHST3	Q7LGC8	479 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	APBA2	Q99767	749 aa		27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	CTDP1	Q9Y5B0	961 aa	Predicted RBP	27.86	■■■□□ 2.05
DENND3-215	ENST00000520986	INHA	P05111	366 aa		27.85	■■■□□ 2.05
DENND3-215	ENST00000520986	SLC16A2	P36021	539 aa		27.85	■■■□□ 2.05
DENND3-215	ENST00000520986	TRIB2	Q92519	343 aa		27.85	■■■□□ 2.05
DENND3-215	ENST00000520986	RIPK3	Q9Y572	518 aa		27.85	■■■□□ 2.05
DENND3-215	ENST00000520986	ADORA2A	P29274	412 aa		27.84	■■■□□ 2.05
DENND3-215	ENST00000520986	COPB2	P35606	906 aa		27.84	■■■□□ 2.05
DENND3-215	ENST00000520986	OAZ1	P54368	228 aa		27.84	■■■□□ 2.05
DENND3-215	ENST00000520986	UBXN2A	P68543	259 aa		27.84	■■■□□ 2.05
DENND3-215	ENST00000520986	IFIT3	O14879	490 aa	Known RBP	27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	HMGCR	P04035	888 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	SNAP25	P60880	206 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	COL9A3	Q14050	684 aa	Predicted RBP	27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	CCL14	Q16627	93 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	RNF20	Q5VTR2	975 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	ABRA	Q8N0Z2	381 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	ZNF536	O15090	1300 aa		27.83	■■■□□ 2.05
DENND3-215	ENST00000520986	POTEF	A5A3E0	1075 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	HOXC6	P09630	235 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	GOLGA8H	P0CJ92	632 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	FCER1A	P12319	257 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	SLC4A3	P48751	1232 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	TRIM32	Q13049	653 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	SYDE2	Q5VT97	1194 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	NPLOC4	Q8TAT6	608 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	SENP2	Q9HC62	589 aa		27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	ZNFX1	Q9P2E3	1918 aa	Known RBP	27.82	■■■□□ 2.04
DENND3-215	ENST00000520986	CCL5	P13501	91 aa		27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	ZKSCAN1	P17029	563 aa	Predicted RBP	27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	GPATCH4	Q5T3I0	446 aa	Known RBP	27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	TRMT44	Q8IYL2	757 aa	Known RBP	27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	MMP19	Q99542	508 aa		27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	TMEM106C	Q9BVX2	250 aa		27.81	■■■□□ 2.04
DENND3-215	ENST00000520986	ERICH2	A1L162	156 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	COBL	O75128	1261 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	WTAP	Q15007	396 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	SART3	Q15020	963 aa	Known RBP	27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	TMEM67	Q5HYA8	995 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	CCDC174	Q6PII3	467 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	DPP9	Q86TI2	863 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	RASEF	Q8IZ41	740 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	IGDCC4	Q8TDY8	1250 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	AGBL1	Q96MI9	1066 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	UNC93B1	Q9H1C4	597 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	RANBP17	Q9H2T7	1088 aa	Known RBP	27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	FLRT1	Q9NZU1	646 aa		27.8	■■■□□ 2.04
DENND3-215	ENST00000520986	PRC1	O43663	620 aa		27.79	■■■□□ 2.04
DENND3-215	ENST00000520986	MCM5	P33992	734 aa		27.79	■■■□□ 2.04
DENND3-215	ENST00000520986	REC8	O95072	547 aa		27.78	■■■□□ 2.04
DENND3-215	ENST00000520986	KCTD2	Q14681	263 aa		27.78	■■■□□ 2.04
DENND3-215	ENST00000520986	TSGA10IP	Q3SY00	556 aa		27.78	■■■□□ 2.04
DENND3-215	ENST00000520986	ASPRV1	Q53RT3	343 aa		27.78	■■■□□ 2.04
DENND3-215	ENST00000520986	UBA5	Q9GZZ9	404 aa		27.78	■■■□□ 2.04
DENND3-215	ENST00000520986	RNF208	Q9H0X6	261 aa		27.78	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms