RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GTF3C2Q8WUA4 911 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-222ENST00000520948 USP6NLQ92738 828 aa21.34■■□□□ 1.01
VEGFA-222ENST00000520948 PFASO15067 1338 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 EIF5BO60841 1220 aaKnown RBP21.33■■□□□ 1.01
VEGFA-222ENST00000520948 CNMDO75829 334 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 RGS2P41220 211 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 ANTXR2P58335 489 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 ATP2B2Q01814 1243 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 CCDC178Q5BJE1 867 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 MORN1Q5T089 497 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 ZSCAN10Q96SZ4 725 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-222ENST00000520948 APBA2Q99767 749 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 GDF15Q99988 308 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 ZKSCAN3Q9BRR0 538 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 SNX14Q9Y5W7 946 aa21.33■■□□□ 1.01
VEGFA-222ENST00000520948 LAMA3Q16787 3333 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L15C9J2P7 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L13C9JLJ4 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L11C9JVI0 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L18D6R9N7 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L22D6RA61 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L17D6RBQ6 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L19D6RCP7 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L20D6RJB6 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 F5H6K3 240 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 VCAM1P19320 739 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 KLRC3Q07444 240 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 USP17L24Q0WX57 530 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 SEC23AQ15436 765 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 ADCK5Q3MIX3 580 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 WDR78Q5VTH9 848 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 IQCA1Q86XH1 822 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 TRMT44Q8IYL2 757 aaKnown RBP21.32■■□□□ 1
VEGFA-222ENST00000520948 LPAR1Q92633 364 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 STX8Q9UNK0 236 aa21.32■■□□□ 1
VEGFA-222ENST00000520948 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
VEGFA-222ENST00000520948 GMCL1P1Q8NEA9 526 aa21.31■■□□□ 1
VEGFA-222ENST00000520948 TMEM47Q9BQJ4 181 aa21.31■■□□□ 1
VEGFA-222ENST00000520948 GOPCQ9HD26 462 aa21.31■■□□□ 1
VEGFA-222ENST00000520948 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
VEGFA-222ENST00000520948 MAGEA10P43363 369 aaPredicted RBP21.3■■□□□ 1
VEGFA-222ENST00000520948 MAP2K5Q13163 448 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 KRT32Q14532 448 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 CATSPERGQ6ZRH7 1159 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 ENAHQ8N8S7 591 aaPredicted RBP21.3■■□□□ 1
VEGFA-222ENST00000520948 IGDCC4Q8TDY8 1250 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 NEK1Q96PY6 1258 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 MTA3Q9BTC8 594 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 RABGAP1Q9Y3P9 1069 aa21.3■■□□□ 1
VEGFA-222ENST00000520948 WDR46O15213 610 aaKnown RBP21.29■■□□□ 1
VEGFA-222ENST00000520948 BMP8BP34820 402 aa21.29■■□□□ 1
VEGFA-222ENST00000520948 EXOSC10Q01780 885 aaKnown RBP21.29■■□□□ 1
VEGFA-222ENST00000520948 LHX8Q68G74 356 aa21.29■■□□□ 1
VEGFA-222ENST00000520948 LRRC47Q8N1G4 583 aaKnown RBP21.29■■□□□ 1
VEGFA-222ENST00000520948 FLRT1Q9NZU1 646 aa21.29■■□□□ 1
VEGFA-222ENST00000520948 RLFQ13129 1914 aa21.29■■□□□ 1
VEGFA-222ENST00000520948 TNKSO95271 1327 aa21.29■■□□□ 1
VEGFA-222ENST00000520948 NDUFB10O96000 172 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 CCNA1P78396 465 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 CHST3Q7LGC8 479 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 SPICE1Q8N0Z3 855 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 IL17RAQ96F46 866 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
VEGFA-222ENST00000520948 BTBD7Q9P203 1132 aa21.28■■□□□ 1
VEGFA-222ENST00000520948 COL6A1P12109 1028 aa21.27■■□□□ 1
VEGFA-222ENST00000520948 MCM5P33992 734 aa21.27■■□□□ 1
VEGFA-222ENST00000520948 GMCL1Q96IK5 515 aa21.27■■□□□ 1
VEGFA-222ENST00000520948 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
VEGFA-222ENST00000520948 PARP14Q460N5 1801 aa21.27■□□□□ 0.99
VEGFA-222ENST00000520948 SPDYE16A6NNV3 312 aaPredicted RBP21.26■□□□□ 0.99
VEGFA-222ENST00000520948 IFIT3O14879 490 aaKnown RBP21.26■□□□□ 0.99
VEGFA-222ENST00000520948 PRC1O43663 620 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 PTPREP23469 700 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 MCCP23508 829 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 LRRC26Q2I0M4 334 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 SLFN13Q68D06 897 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 WDR19Q8NEZ3 1342 aa21.26■□□□□ 0.99
VEGFA-222ENST00000520948 SLC15A5A6NIM6 579 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 HMGB1P09429 215 aaKnown RBP21.25■□□□□ 0.99
VEGFA-222ENST00000520948 SNHG28P0DPA3 235 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 COG2Q14746 738 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 FAM83BQ5T0W9 1011 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 LBX2Q6XYB7 198 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 DHX32Q7L7V1 743 aaKnown RBP21.25■□□□□ 0.99
VEGFA-222ENST00000520948 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 UBE2OQ9C0C9 1292 aaKnown RBP21.25■□□□□ 0.99
VEGFA-222ENST00000520948 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 IVNS1ABPQ9Y6Y0 642 aa21.25■□□□□ 0.99
VEGFA-222ENST00000520948 A0A0G2JMZ2 1700 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 CNGA1P29973 690 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 ANAPC15P60006 121 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
VEGFA-222ENST00000520948 TDHQ8IZJ6 230 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 PNMA1Q8ND90 353 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 NPLOC4Q8TAT6 608 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
VEGFA-222ENST00000520948 NUP88Q99567 741 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-222ENST00000520948 TM6SF1Q9BZW5 370 aa21.24■□□□□ 0.99
VEGFA-222ENST00000520948 LY9Q9HBG7 655 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms