RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 ZNF865P0CJ78 1059 aaPredicted RBP13.79□□□□□ -0.2
MRPS28-206ENST00000520946 ADD2P35612 726 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 EPHB4P54760 987 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
MRPS28-206ENST00000520946 FAAP100Q0VG06 881 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 ANKRD33Q7Z3H0 272 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 ANKRD35Q8N283 1001 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
MRPS28-206ENST00000520946 ADAMTS5Q9UNA0 930 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 SMCHD1A6NHR9 2005 aa13.79□□□□□ -0.2
MRPS28-206ENST00000520946 DUSP11O75319 330 aaKnown RBP13.78□□□□□ -0.2
MRPS28-206ENST00000520946 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-206ENST00000520946 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
MRPS28-206ENST00000520946 PANK1Q8TE04 598 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 ELP1O95163 1332 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 SYNGAP1Q96PV0 1343 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 MYH8P13535 1937 aa13.78□□□□□ -0.2
MRPS28-206ENST00000520946 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
MRPS28-206ENST00000520946 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 ADAMTS4O75173 837 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 IGFBP4P22692 258 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 CTR9Q6PD62 1173 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 KIFC2Q96AC6 838 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 ZNF287Q9HBT7 754 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 ARPP21Q9UBL0 812 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
MRPS28-206ENST00000520946 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-206ENST00000520946 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 F5H6K3 240 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 ASGR1P07306 291 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 ATP5JP18859 108 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 KLRC3Q07444 240 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 SLFNL1Q499Z3 407 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 PSRC1Q6PGN9 363 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-206ENST00000520946 ZNF444Q8N0Y2 327 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-206ENST00000520946 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-206ENST00000520946 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-206ENST00000520946 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
MRPS28-206ENST00000520946 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 ARVCFO00192 962 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-206ENST00000520946 APPP05067 770 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 CSF2RAP15509 400 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 IKQ13123 557 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-206ENST00000520946 RAB30Q15771 203 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-206ENST00000520946 MAMDC4Q6UXC1 1216 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 HAUS7Q99871 368 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
MRPS28-206ENST00000520946 A0A0G2JMZ2 1700 aa13.75□□□□□ -0.21
MRPS28-206ENST00000520946 ZEB2O60315 1214 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 ACRP10323 421 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
MRPS28-206ENST00000520946 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
MRPS28-206ENST00000520946 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 HOMER2Q9NSB8 354 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 NYAP2Q9P242 653 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
MRPS28-206ENST00000520946 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
MRPS28-206ENST00000520946 MYADML2A6NDP7 307 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 GRXCR1A8MXD5 290 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 SMIM22K7EJ46 135 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 NDUFB10O96000 172 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 FGBP02675 491 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 COL9A1P20849 921 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 CST5P28325 142 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-206ENST00000520946 TDO2P48775 406 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 MRPS5P82675 430 aaKnown RBP13.73□□□□□ -0.21
MRPS28-206ENST00000520946 TMEM240Q5SV17 173 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 ARMCX2Q7L311 632 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 USP38Q8NB14 1042 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 FEM1BQ9UK73 627 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 TBX21Q9UL17 535 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
MRPS28-206ENST00000520946 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms