RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
TRAPPC9-208ENST00000520857 LIMA1Q9UHB6 759 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-208ENST00000520857 H7C1D1 291 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 EVA1CP58658 441 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 C8orf74Q6P047 294 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 ELOA2Q8IYF1 753 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 ZBTB38Q8NAP3 1195 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 AGPAT5Q9NUQ2 364 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 GSG1L2A8MUP6 293 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 STARD3NLO95772 234 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 PUM3Q15397 648 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 C2CD5Q86YS7 1000 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 RNF26Q9BY78 433 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 IFIH1Q9BYX4 1025 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 NHEJ1Q9H9Q4 299 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 CDHR2Q9BYE9 1310 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 EXOC5O00471 708 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 HPDP32754 393 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 CDR1P51861 262 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 VAV2P52735 878 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 ASIC1P78348 528 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 RASGRF1Q13972 1273 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 ODF2Q5BJF6 829 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 CCNI2Q6ZMN8 369 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 CACNA2D4Q7Z3S7 1137 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
TRAPPC9-208ENST00000520857 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 RTL9Q8NET4 1388 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 XDHP47989 1333 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 PBX1P40424 430 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 BCAMP50895 628 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 SH2D3CQ8N5H7 860 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 RRP36Q96EU6 259 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■■□ 22.8
TRAPPC9-208ENST00000520857 KDM3BQ7LBC6 1761 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 ITIH6Q6UXX5 1313 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 GOLGA6L10A6NI86 522 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 TULP1O00294 542 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 CTSWP56202 376 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 CT47A1Q5JQC4 288 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 LPIN2Q92539 896 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 LRRC1Q9BTT6 524 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 RIPOR2Q9Y4F9 1068 aa14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 MED1Q15648 1581 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-208ENST00000520857 WNT7AO00755 349 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 SSBP05455 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 MAP2K2P36507 400 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 AMPD2Q01433 879 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 EXOC1Q9NV70 894 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 SOS2Q07890 1332 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 MOCS3O95396 460 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 KLK7P49862 253 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 DNM2P50570 870 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 DTHD1Q6ZMT9 781 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 MLXIPQ9HAP2 919 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 MRC1P22897 1456 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 PSMD14O00487 310 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 BUB1O43683 1085 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 RPS6KA5O75582 802 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 GNAT2P19087 354 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 GIMAP7Q8NHV1 300 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 EHD2Q9NZN4 543 aa14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 DMGDHQ9UI17 866 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 REXO2Q9Y3B8 237 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-208ENST00000520857 PP2D1A8MPX8 630 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 HERVK_113P62684 666 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 ARID5AQ03989 594 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 PDE4DQ08499 809 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 HDAC7Q8WUI4 952 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 PDE2AO00408 941 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 HLFQ16534 295 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 LAMA4Q16363 1823 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 LTN1O94822 1766 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 ESYT3A0FGR9 886 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 FAM47AQ5JRC9 791 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 NFRKBQ6P4R8 1299 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
TRAPPC9-208ENST00000520857 GOLGA8KD6RF30 607 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms