RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 RBPJLQ9UBG7 517 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 MORF4L1Q9UBU8 362 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 RLFQ13129 1914 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 VWA5AO00534 786 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 PDIA3P30101 505 aaKnown RBP20.29■□□□□ 0.84
TRAM1-203ENST00000520700 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 STAG2Q8N3U4 1231 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 SLC38A10Q9HBR0 1119 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
TRAM1-203ENST00000520700 PRR12Q9ULL5 1215 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 MTMR7Q9Y216 660 aa20.29■□□□□ 0.84
TRAM1-203ENST00000520700 FRMPD2Q68DX3 1309 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-203ENST00000520700 CCDC196A0A1B0GTZ2 297 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 GOLGA8HP0CJ92 632 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 OAZ1P54368 228 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 FAM110CQ1W6H9 321 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 SYDE2Q5VT97 1194 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 REPS2Q8NFH8 660 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 ATG4CQ96DT6 458 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 MYL10Q9BUA6 226 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
TRAM1-203ENST00000520700 ZBED4O75132 1171 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 CNMDO75829 334 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 TBC1D8O95759 1140 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 MTMR8Q96EF0 704 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.84
TRAM1-203ENST00000520700 PNMA2Q9UL42 364 aa20.27■□□□□ 0.84
TRAM1-203ENST00000520700 ST18O60284 1047 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 SLC16A2P36021 539 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
TRAM1-203ENST00000520700 RTN1Q16799 776 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 MICU3Q86XE3 530 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 KIFC2Q96AC6 838 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 RANBP17Q9H2T7 1088 aaKnown RBP20.26■□□□□ 0.83
TRAM1-203ENST00000520700 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
TRAM1-203ENST00000520700 GOLGA8AA7E2F4 631 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 GOLGA8BA8MQT2 603 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 GPR25O00155 361 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 MCM2P49736 904 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 IKQ13123 557 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-203ENST00000520700 TMTC3Q6ZXV5 915 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 ADGRF4Q8IZF3 695 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-203ENST00000520700 TXNRD2Q9NNW7 524 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 ZNF214Q9UL59 606 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-203ENST00000520700 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
TRAM1-203ENST00000520700 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 PARP14Q460N5 1801 aa20.25■□□□□ 0.83
TRAM1-203ENST00000520700 PFKFB2O60825 505 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 RXRAP19793 462 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 ERVK-24P63145 666 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 FUT2Q10981 343 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 TMEM132BQ14DG7 1078 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 Q3C1V9 767 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
TRAM1-203ENST00000520700 ANKRD13CQ8N6S4 541 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 JMJD4Q9H9V9 463 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 CPA4Q9UI42 421 aa20.24■□□□□ 0.83
TRAM1-203ENST00000520700 CYTH3O43739 400 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 CDC27P30260 824 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 COPB2P35606 906 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 ADD1P35611 737 aaKnown RBP20.23■□□□□ 0.83
TRAM1-203ENST00000520700 CCNA1P78396 465 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 SP3Q02447 781 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 NBPF11Q86T75 865 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 SPATC1LQ9H0A9 340 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 ZNF536O15090 1300 aa20.23■□□□□ 0.83
TRAM1-203ENST00000520700 SLC25A27O95847 323 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 STAT3P40763 770 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 NTRK3Q16288 839 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 RIOX2Q8IUF8 465 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 CCDC144CPQ8IYA2 1237 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
TRAM1-203ENST00000520700 TEX13BQ9BXU2 312 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 SLKQ9H2G2 1235 aaPredicted RBP20.22■□□□□ 0.83
TRAM1-203ENST00000520700 CPVLQ9H3G5 476 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
TRAM1-203ENST00000520700 ZBTB5O15062 677 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 ICAM1P05362 532 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 HSPA1AP0DMV8 641 aaKnown RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 HSPA1BP0DMV9 641 aaKnown RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 IFNAR1P17181 557 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 TRAF1Q13077 416 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms