RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SLC1A4P43007 532 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 GRM1Q13255 1194 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 PFKFB3Q16875 520 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 SKOR2Q2VWA4 1001 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 SHISA4Q96DD7 197 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 MTMR8Q96EF0 704 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 KIAA1683Q9H0B3 1180 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 GOPCQ9HD26 462 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 ABT1Q9ULW3 272 aaKnown RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 SNCAIPQ9Y6H5 919 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 ZNFX1Q9P2E3 1918 aaKnown RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 hCG_1642624A0A1W2PR95 340 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 RASSF10A6NK89 507 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 H3BQV1 296 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 PLA2G6O60733 806 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 BMP3P12645 472 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 SCG2P13521 617 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 IREB2P48200 963 aaKnown RBP9.85□□□□□ -0.83
VAPB-206ENST00000520497 LBX1P52954 281 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 AKAP17AQ02040 695 aaKnown RBP9.85□□□□□ -0.83
VAPB-206ENST00000520497 RESTQ13127 1097 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 VGLL4Q14135 290 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 CCDC96Q2M329 555 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 DEFB115Q30KQ5 88 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 KRT40Q6A162 431 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 TTBK2Q6IQ55 1244 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 CYP4F22Q6NT55 531 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 BTNL9Q6UXG8 535 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 KCTD1Q719H9 257 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 FAM177A1Q8N128 213 aaPredicted RBP9.85□□□□□ -0.83
VAPB-206ENST00000520497 UBA5Q9GZZ9 404 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 CPVLQ9H3G5 476 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 AS3MTQ9HBK9 375 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 PICK1Q9NRD5 415 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 GJB4Q9NTQ9 266 aa9.85□□□□□ -0.83
VAPB-206ENST00000520497 LCTP09848 1927 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 AOC2O75106 756 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 MMP1P03956 469 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 NCLP19338 710 aaKnown RBP9.84□□□□□ -0.83
VAPB-206ENST00000520497 FOSBP53539 338 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 BACE1P56817 501 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 GUCY1B3Q02153 619 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 PRKG1Q13976 671 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 NPY5RQ15761 445 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
VAPB-206ENST00000520497 OTUD7BQ6GQQ9 843 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 ADGRF4Q8IZF3 695 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 SPICE1Q8N0Z3 855 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 ZNF280CQ8ND82 737 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
VAPB-206ENST00000520497 LPAR1Q92633 364 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 NUP88Q99567 741 aaPredicted RBP9.84□□□□□ -0.83
VAPB-206ENST00000520497 FEZ1Q99689 392 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 PHF20Q9BVI0 1012 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 ZSCAN16Q9H4T2 348 aaPredicted RBP9.84□□□□□ -0.83
VAPB-206ENST00000520497 JMJD4Q9H9V9 463 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 SH3GLB2Q9NR46 395 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
VAPB-206ENST00000520497 UNCXA6NJT0 531 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 KIF28PB7ZC32 967 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 TMEM232C9JQI7 657 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 hCG_1984214I3L0E3 225 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 WDR46O15213 610 aaKnown RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 RAD21O60216 631 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 BAG4O95429 457 aaKnown RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 HSPA8P11142 646 aaKnown RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 XBP1P17861 261 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 U2AF2P26368 475 aaKnown RBP eCLIP9.83□□□□□ -0.842e-6■□□□□ 9.4
VAPB-206ENST00000520497 SLC16A2P36021 539 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 STAT2P52630 851 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 USP14P54578 494 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 SPP2Q13103 211 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 MTMR2Q13614 643 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 ZYXQ15942 572 aaKnown RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 FAM83BQ5T0W9 1011 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 LDLRAD1Q5T700 205 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 WWC2Q6AWC2 1192 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 TYW1BQ6NUM6 668 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 MOB2Q70IA6 237 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 FERMT3Q86UX7 667 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 ANKRD13AQ8IZ07 590 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 ZNF713Q8N859 430 aaPredicted RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 RRP36Q96EU6 259 aaKnown RBP9.83□□□□□ -0.84
VAPB-206ENST00000520497 CAPNS2Q96L46 248 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 PIGSQ96S52 555 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 ZIC5Q96T25 663 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 BARHL2Q9NY43 387 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 VPS54Q9P1Q0 977 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 CSADQ9Y600 493 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms