RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 TFAP4Q01664 338 aa13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 SLC20A2Q08357 652 aa13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 LIN9Q5TKA1 542 aa13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 ZMYM6O95789 1325 aa13.32□□□□□ -0.28
ERGIC1-208ENST00000520399 KDM6BO15054 1643 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 STX10O60499 249 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 BRD1O95696 1058 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 RPSAP08865 295 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 MYCLP12524 364 aaPredicted RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 PTH1RQ03431 593 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 MUM1Q2TAK8 710 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 USH1GQ495M9 461 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 TXNDC9O14530 226 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 ZYXQ15942 572 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 MORC4Q8TE76 937 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 ABTB1Q969K4 478 aaPredicted RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
ERGIC1-208ENST00000520399 IRX4P78413 519 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 MUM1L1Q5H9M0 696 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 THEGQ9P2T0 379 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 SPOPO43791 374 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 LTKP29376 864 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 ADCY9O60503 1353 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 PFKFB2O60825 505 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 PNOCQ13519 176 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 DYMQ7RTS9 669 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 CDAN1Q8IWY9 1227 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 ZC4H2Q9NQZ6 224 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 COG7P83436 770 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 LARGE2Q8N3Y3 721 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 MYCT1Q8N699 235 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
ERGIC1-208ENST00000520399 SLC9C1Q4G0N8 1177 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 HAUS1Q96CS2 278 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 USP21Q9UK80 565 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 RGS12O14924 1447 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 EDC3Q96F86 508 aaKnown RBP13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 SERTAD1Q9UHV2 236 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 KDM3AQ9Y4C1 1321 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 KRT9P35527 623 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 TCP10Q12799 353 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 TRIM68Q6AZZ1 485 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 C8orf74Q6P047 294 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 NFE2L3Q9Y4A8 694 aa13.29□□□□□ -0.28
ERGIC1-208ENST00000520399 POLE2P56282 527 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 EIF2AQ9BY44 585 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 NACA2Q9H009 215 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 TBC1D7Q9P0N9 293 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 PDE6BP35913 854 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 PLCB4Q15147 1175 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 GCNT3O95395 438 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms