RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CTU1Q7Z7A3 348 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ZNF589Q86UQ0 364 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 TEX2Q8IWB9 1127 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 PRPF38AQ8NAV1 312 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 BRI3BPQ8WY22 251 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 MKL1Q969V6 931 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 DYNLL2Q96FJ2 89 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 MS4A4AQ96JQ5 239 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ZSCAN10Q96SZ4 725 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 LZTS2Q9BRK4 669 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 SLKQ9H2G2 1235 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 GRPEL1Q9HAV7 217 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 SEC63Q9UGP8 760 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 RABGAP1Q9Y3P9 1069 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 GPR25O00155 361 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 STRNO43815 780 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 PLA2G6O60733 806 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 KDM4AO75164 1064 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 PRDM1O75626 825 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 RGS20O76081 388 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 DDAH1O94760 285 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 FGRP09769 529 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 PARP1P09874 1014 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CYP2D6P10635 497 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 RCAN1P53805 252 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 HERVK_113P62684 666 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CTDSPL2Q05D32 466 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CRHR2Q13324 411 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 SKOR2Q2VWA4 1001 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 TMEM67Q5HYA8 995 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 BLOC1S2Q6QNY1 142 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 LBX2Q6XYB7 198 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 STK11IPQ8N1F8 1099 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 RAET1EQ8TD07 263 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 SNX21Q969T3 373 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CEP95Q96GE4 821 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 NEK1Q96PY6 1258 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 SLF1Q9BQI6 1058 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 MROH8Q9H579 483 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 RPAP3Q9H6T3 665 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 DNAJC18Q9H819 358 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 EFCC1Q9HA90 598 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CYP46A1Q9Y6A2 500 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 CDK5RAP2Q96SN8 1893 aa6.56□□□□□ -1.36
CTNNA1-220ENST00000520260 ATAD5Q96QE3 1844 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 TNKSO95271 1327 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 CYP2D7A0A087X1C5 515 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 E7EWF7 191 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 F5H6K3 240 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 CDKL5O76039 1030 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 UBXN2AP68543 259 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 AKAP17AQ02040 695 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 KLRC3Q07444 240 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 KCTD2Q14681 263 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 VPS53Q5VIR6 699 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 WDR78Q5VTH9 848 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 CREB3L3Q68CJ9 461 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 CATSPERGQ6ZRH7 1159 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 MCF2L2Q86YR7 1114 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC44A5Q8NCS7 719 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 MAP3K14Q99558 947 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 TEX13BQ9BXU2 312 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 PANK2Q9BZ23 570 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 GLT8D2Q9H1C3 349 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 ASCC2Q9H1I8 757 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 PDCL3Q9H2J4 239 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 RBM28Q9NW13 759 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 FZD1Q9UP38 647 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 KIF3AQ9Y496 699 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 MYO5AQ9Y4I1 1855 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 LAMA4Q16363 1823 aa6.55□□□□□ -1.36
CTNNA1-220ENST00000520260 BAZ2AQ9UIF9 1905 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PFASO15067 1338 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 B4E1Z4 1266 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 hCG_1984214I3L0E3 225 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC27A2O14975 620 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 FOXN1O15353 648 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PRC1O43663 620 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 TBC1D8O95759 1140 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 NDUFB10O96000 172 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 CYP21A2P08686 494 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 HSPA8P11142 646 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 FCER1AP12319 257 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 XBP1P17861 261 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 RGS2P41220 211 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 LIFRP42702 1097 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 LBX1P52954 281 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 LACTBP83111 547 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PLS1Q14651 629 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms