RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-206ENST00000520002 FLOT1O75955 427 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 SFMBT2Q5VUG0 894 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 PARP9Q8IXQ6 854 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 ACTR5Q9H9F9 607 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-206ENST00000520002 ARHGEF35A5YM69 484 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 MAP7D3Q8IWC1 876 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 DAPK3O43293 454 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 TTLL11Q8NHH1 800 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 AOX1Q06278 1338 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 USH1GQ495M9 461 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 DCUN1D2Q6PH85 259 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 ENC1O14682 589 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 DNAJC6O75061 913 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 DDB1Q16531 1140 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 CYTH2Q99418 400 aa9.54□□□□□ -0.88
CSMD1-206ENST00000520002 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSMD1-206ENST00000520002 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 SCP2P22307 547 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 TXKP42681 527 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 ADCY1Q08828 1119 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 ITGA6P23229 1130 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 MSH2P43246 934 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 INPP1P49441 399 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 SATB2Q9UPW6 733 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 A0A087WWV3 80 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 GCNT3O95395 438 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 MAGEA1P43355 309 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 ZNF449Q6P9G9 518 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 G2E3Q7L622 706 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 FAM207AQ9NSI2 230 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 KCNK3O14649 394 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 STRN3Q13033 797 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 SRGAP1Q7Z6B7 1085 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 CACTINQ8WUQ7 758 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 KIF9Q9HAQ2 790 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 ZCCHC17Q9NP64 241 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 PICK1Q9NRD5 415 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 TADA3O75528 432 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 MRPS25P82663 173 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 C2CD5Q86YS7 1000 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 MYO5CQ9NQX4 1742 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 MYCLP12524 364 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 PDCLQ13371 301 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 KIAA2013Q8IYS2 634 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 AFAP1L2Q8N4X5 818 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 KRT12Q99456 494 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
CSMD1-206ENST00000520002 ADAM21Q9UKJ8 722 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 BUB1O43683 1085 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 CCDC93Q567U6 631 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 SNX14Q9Y5W7 946 aa9.53□□□□□ -0.88
CSMD1-206ENST00000520002 PLXNC1O60486 1568 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-206ENST00000520002 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.88
CSMD1-206ENST00000520002 ADCY7P51828 1080 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 TIMM10P62072 90 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 XAGE2Q96GT9 111 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 HOMER3Q9NSC5 361 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 KCNJ14Q9UNX9 436 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 TSC22D4Q9Y3Q8 395 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.88
CSMD1-206ENST00000520002 RASSF10A6NK89 507 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 DEUP1Q05D60 604 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 HERC4Q5GLZ8 1057 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-206ENST00000520002 JDP2Q8WYK2 163 aa9.52□□□□□ -0.88
CSMD1-206ENST00000520002 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 TFCP2L1Q9NZI6 479 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ESRRGP62508 458 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ZYXQ15942 572 aaKnown RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 RRAGAQ7L523 313 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 COL17A1Q9UMD9 1497 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 PDE4DIPQ5VU43 2346 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 JAK2O60674 1132 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 S100BP04271 92 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 SYCE1Q8N0S2 351 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 KLHL29Q96CT2 875 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 EXOC7Q9UPT5 735 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 SLC35F6Q8N357 371 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 TRIM58Q8NG06 486 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms