RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 TEX13BQ9BXU2 312 aa13.55□□□□□ -0.24
SPIDR-212ENST00000519661 ANO2Q9NQ90 1003 aa13.55□□□□□ -0.24
SPIDR-212ENST00000519661 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
SPIDR-212ENST00000519661 BRCA2P51587 3418 aa13.55□□□□□ -0.24
SPIDR-212ENST00000519661 REC8O95072 547 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 PTPREP23469 700 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 MCCP23508 829 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 HSPA4P34932 840 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 MAP3K21Q5TCX8 1036 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 IGDCC4Q8TDY8 1250 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 TOMM22Q9NS69 142 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 PNMA2Q9UL42 364 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 GABRQQ9UN88 632 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 ZNF536O15090 1300 aa13.54□□□□□ -0.24
SPIDR-212ENST00000519661 PEX10O60683 326 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 GRK4P32298 578 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 STAT3P40763 770 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 LIFRP42702 1097 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 TROAPQ12815 778 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
SPIDR-212ENST00000519661 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 NUDT12Q9BQG2 462 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 UBAC1Q9BSL1 405 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
SPIDR-212ENST00000519661 RANBP17Q9H2T7 1088 aaKnown RBP13.53□□□□□ -0.24
SPIDR-212ENST00000519661 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
SPIDR-212ENST00000519661 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 TMEM232C9JQI7 657 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 ERCC3P19447 782 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 MCM5P33992 734 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 KRT32Q14532 448 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 SART3Q15020 963 aaKnown RBP13.52□□□□□ -0.25
SPIDR-212ENST00000519661 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 SGMS1Q86VZ5 419 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 TMTC2Q8N394 836 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 MTMR8Q96EF0 704 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 APBA2Q99767 749 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 DOCK3Q8IZD9 2030 aa13.52□□□□□ -0.25
SPIDR-212ENST00000519661 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-212ENST00000519661 ADCY3O60266 1144 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
SPIDR-212ENST00000519661 ZBED4O75132 1171 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
SPIDR-212ENST00000519661 RGS2P41220 211 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 RCAN1P53805 252 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
SPIDR-212ENST00000519661 SLC9C1Q4G0N8 1177 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
SPIDR-212ENST00000519661 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 FBXO40Q9UH90 709 aa13.51□□□□□ -0.25
SPIDR-212ENST00000519661 HMGCRP04035 888 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 ICAM1P05362 532 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-212ENST00000519661 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 GHRHRQ02643 423 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 COL9A3Q14050 684 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-212ENST00000519661 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-212ENST00000519661 MSL3Q8N5Y2 521 aaKnown RBP13.5□□□□□ -0.25
SPIDR-212ENST00000519661 ZKSCAN3Q9BRR0 538 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 USP26Q9BXU7 913 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 PAK6Q9NQU5 681 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-212ENST00000519661 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
SPIDR-212ENST00000519661 COL11A1P12107 1806 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-212ENST00000519661 SH2B2O14492 632 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-212ENST00000519661 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
SPIDR-212ENST00000519661 DDAH1O94760 285 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 ADORA2AP29274 412 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 GRM4Q14833 912 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 SYDE2Q5VT97 1194 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 TRIB2Q92519 343 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 KIFC2Q96AC6 838 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 NEK1Q96PY6 1258 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 RIPK3Q9Y572 518 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 IVNS1ABPQ9Y6Y0 642 aa13.49□□□□□ -0.25
SPIDR-212ENST00000519661 NID2Q14112 1375 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 PRC1O43663 620 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 FCER1AP12319 257 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 EVCP57679 992 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 WTAPQ15007 396 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
SPIDR-212ENST00000519661 ZNF792Q3KQV3 632 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 SNRNP48Q6IEG0 339 aaKnown RBP13.48□□□□□ -0.25
SPIDR-212ENST00000519661 TTBK2Q6IQ55 1244 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms