RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 HSPA1BP0DMV9 641 aaKnown RBP28.26■■■□□ 2.11
PCM1-209ENST00000518930 RXRAP19793 462 aa28.26■■■□□ 2.11
PCM1-209ENST00000518930 RAB11FIP4Q86YS3 637 aa28.26■■■□□ 2.11
PCM1-209ENST00000518930 MB21D1Q8N884 522 aa28.26■■■□□ 2.11
PCM1-209ENST00000518930 PAGR1Q9BTK6 254 aa28.26■■■□□ 2.11
PCM1-209ENST00000518930 ALDH8A1Q9H2A2 487 aaPredicted RBP28.26■■■□□ 2.11
PCM1-209ENST00000518930 COL11A1P12107 1806 aaPredicted RBP28.25■■■□□ 2.11
PCM1-209ENST00000518930 SLC16A2P36021 539 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 RCAN1P53805 252 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 SYDE2Q5VT97 1194 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 TTBK2Q6IQ55 1244 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 BTNL9Q6UXG8 535 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 CCDC144CPQ8IYA2 1237 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 ANKRD13CQ8N6S4 541 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 MAD2L2Q9UI95 211 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 TSKSQ9UJT2 592 aa28.25■■■□□ 2.11
PCM1-209ENST00000518930 GOLGA8AA7E2F4 631 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 KLRF2D3W0D1 207 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 AK2P54819 239 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 R3HDMLQ9H3Y0 253 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 PRR12Q9ULL5 1215 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 RABGAP1Q9Y3P9 1069 aa28.24■■■□□ 2.11
PCM1-209ENST00000518930 PALM3A6NDB9 673 aaPredicted RBP28.23■■■□□ 2.11
PCM1-209ENST00000518930 VWA5AO00534 786 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 DHX16O60231 1041 aaKnown RBP28.23■■■□□ 2.11
PCM1-209ENST00000518930 ZBED4O75132 1171 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 FDX1P10109 184 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 GNAQP50148 359 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 METAP2P50579 478 aaKnown RBP eCLIP28.23■■■□□ 2.11
PCM1-209ENST00000518930 FAM110CQ1W6H9 321 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 C17orf99Q6UX52 265 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 STAG2Q8N3U4 1231 aa28.23■■■□□ 2.11
PCM1-209ENST00000518930 RBM28Q9NW13 759 aaKnown RBP28.23■■■□□ 2.11
PCM1-209ENST00000518930 BCRP11274 1271 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 RTN1Q16799 776 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 FANCBQ8NB91 859 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 IL27Q8NEV9 243 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 UBA5Q9GZZ9 404 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 MORF4L1Q9UBU8 362 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 ADAMTS5Q9UNA0 930 aa28.22■■■□□ 2.11
PCM1-209ENST00000518930 GPR25O00155 361 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 ST18O60284 1047 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 EVCP57679 992 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 ERVK-9P63128 1117 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 ERVK-24P63145 666 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 GPRC5AQ8NFJ5 357 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 LZTS2Q9BRK4 669 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 RBPJLQ9UBG7 517 aa28.21■■■□□ 2.11
PCM1-209ENST00000518930 FOXN1O15353 648 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 PLS1Q14651 629 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 NOM1Q5C9Z4 860 aaKnown RBP28.2■■■□□ 2.1
PCM1-209ENST00000518930 NOL8Q76FK4 1167 aaKnown RBP28.2■■■□□ 2.1
PCM1-209ENST00000518930 ZNF274Q96GC6 653 aaPredicted RBP28.2■■■□□ 2.1
PCM1-209ENST00000518930 LARP6Q9BRS8 491 aaKnown RBP28.2■■■□□ 2.1
PCM1-209ENST00000518930 CPVLQ9H3G5 476 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 SLC38A10Q9HBR0 1119 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 TXNRD2Q9NNW7 524 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 BTBD7Q9P203 1132 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 NID2Q14112 1375 aa28.2■■■□□ 2.1
PCM1-209ENST00000518930 CCDC196A0A1B0GTZ2 297 aa28.19■■■□□ 2.1
PCM1-209ENST00000518930 CTCFP49711 727 aaPredicted RBP28.19■■■□□ 2.1
PCM1-209ENST00000518930 CCNA1P78396 465 aa28.19■■■□□ 2.1
PCM1-209ENST00000518930 SP3Q02447 781 aa28.19■■■□□ 2.1
PCM1-209ENST00000518930 PPP2R5BQ15173 497 aa28.19■■■□□ 2.1
PCM1-209ENST00000518930 ADGRF4Q8IZF3 695 aa28.19■■■□□ 2.1
PCM1-209ENST00000518930 CNMDO75829 334 aa28.18■■■□□ 2.1
PCM1-209ENST00000518930 PDIA3P30101 505 aaKnown RBP28.18■■■□□ 2.1
PCM1-209ENST00000518930 TMEM132BQ14DG7 1078 aa28.18■■■□□ 2.1
PCM1-209ENST00000518930 RANBP17Q9H2T7 1088 aaKnown RBP28.18■■■□□ 2.1
PCM1-209ENST00000518930 FKTNO75072 461 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 HSPA8P11142 646 aaKnown RBP28.17■■■□□ 2.1
PCM1-209ENST00000518930 OAZ1P54368 228 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 KIF22Q14807 665 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 CCDC174Q6PII3 467 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 POTEEQ6S8J3 1075 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 TMTC3Q6ZXV5 915 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 CCAR1Q8IX12 1150 aaKnown RBP28.17■■■□□ 2.1
PCM1-209ENST00000518930 SPATC1LQ9H0A9 340 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 VAT1LQ9HCJ6 419 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 HPS5Q9UPZ3 1129 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 MYH6P13533 1939 aa28.17■■■□□ 2.1
PCM1-209ENST00000518930 PEX10O60683 326 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 PLEKHA8P1O95397 391 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 SNAP25P60880 206 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 STK3Q13188 491 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 CPXCR1Q8N123 301 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 REPS2Q8NFH8 660 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 ZNF296Q8WUU4 475 aaPredicted RBP28.16■■■□□ 2.1
PCM1-209ENST00000518930 SPZ1Q9BXG8 430 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 TEX13BQ9BXU2 312 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 CWC22Q9HCG8 908 aaKnown RBP28.16■■■□□ 2.1
PCM1-209ENST00000518930 ZNF214Q9UL59 606 aaPredicted RBP28.16■■■□□ 2.1
PCM1-209ENST00000518930 TPCN1Q9ULQ1 816 aa28.16■■■□□ 2.1
PCM1-209ENST00000518930 SMARCA1P28370 1054 aa28.15■■■□□ 2.1
PCM1-209ENST00000518930 CCT2P78371 535 aaKnown RBP28.15■■■□□ 2.1
PCM1-209ENST00000518930 CDC37Q16543 378 aaPredicted RBP28.15■■■□□ 2.1
PCM1-209ENST00000518930 ERO1AQ96HE7 468 aa28.15■■■□□ 2.1
PCM1-209ENST00000518930 SLKQ9H2G2 1235 aaPredicted RBP28.15■■■□□ 2.1
PCM1-209ENST00000518930 RAVER2Q9HCJ3 691 aaKnown RBP28.15■■■□□ 2.1
PCM1-209ENST00000518930 MGAMO43451 1857 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms