RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ID3Q02535 119 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 SRSF11Q05519 484 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 GNPTABQ3T906 1256 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 PPM1JQ5JR12 505 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ERICH6BQ5W0A0 696 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 PHACTR4Q8IZ21 702 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 GALNT11Q8NCW6 608 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 PRAM1Q96QH2 718 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 CWC22Q9HCG8 908 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 STK26Q9P289 416 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ADAMTS8Q9UP79 889 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 PCDHGC5Q9Y5F6 944 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 CD2APQ9Y5K6 639 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 IQSEC2Q5JU85 1478 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ZNF521Q96K83 1311 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 POLR3AO14802 1390 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 NSD2O96028 1365 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 METP08581 1390 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 ADAMTS13Q76LX8 1427 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 H3BM21 787 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 AGRPO00253 132 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 MARCH6O60337 910 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 FAM153BP0C7A2 387 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 NAT2P11245 290 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 CD68P34810 354 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 MASP1P48740 699 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 ERVK-24P63145 666 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 SAFB2Q14151 953 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 BBS9Q3SYG4 887 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 ZBTB37Q5TC79 503 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 EDARADDQ8WWZ3 215 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 ACDQ96AP0 544 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 SLC26A8Q96RN1 970 aa6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 COL3A1P02461 1466 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-212ENST00000518919 TMEM2Q9UHN6 1383 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 TM4SF5O14894 197 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 FANCGO15287 622 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 TMPRSS2O15393 492 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 ADCY3O60266 1144 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 DLGAP3O95886 979 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 HCLS1P14317 486 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 CCNFP41002 786 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 AMPD3Q01432 767 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 WDR43Q15061 677 aaKnown RBP eCLIP6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 LONRF2Q1L5Z9 754 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 AKAP4Q5JQC9 854 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 Q6ZNB5 142 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 C1orf229Q6ZS94 237 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 NPAS3Q8IXF0 933 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 ZBTB38Q8NAP3 1195 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 UBASH3BQ8TF42 649 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 TMEM87BQ96K49 555 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 FAM86C1Q9NVL1 165 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 AP4E1Q9UPM8 1137 aa6.18□□□□□ -1.42
CTNNA1-212ENST00000518919 MED14O60244 1454 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 ATP7BP35670 1465 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 ARHGAP23Q9P227 1491 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 ADAMTS2O95450 1211 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 AMPD1P23109 780 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 CNGA1P29973 690 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 RING1Q06587 406 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 SV2CQ496J9 727 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 DALRD3Q5D0E6 543 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 ZC3H12BQ5HYM0 836 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 HID1Q8IV36 788 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 MCATQ8IVS2 390 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 MRPL41Q8IXM3 137 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 GALNT6Q8NCL4 622 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 ZNF507Q8TCN5 953 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 MFSD3Q96ES6 412 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 SGSM3Q96HU1 749 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 KIF2CQ99661 725 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 KCNK4Q9NYG8 393 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 CGNL1Q0VF96 1302 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 SYNGAP1Q96PV0 1343 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 PLEKHG1Q9ULL1 1385 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 C3P01024 1663 aa6.17□□□□□ -1.42
CTNNA1-212ENST00000518919 FAM135BQ49AJ0 1406 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 ANKRD26Q9UPS8 1709 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 SLIT1O75093 1534 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 ADGRB2O60241 1585 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms