RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 JMYQ8N9B5 988 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 ZSWIM5Q9P217 1185 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 LRP2BPQ9P2M1 347 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 AKT3Q9Y243 479 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 EMC9Q9Y3B6 208 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 SHISA3A0PJX4 238 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 H3BS24 57 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 PRNPP04156 253 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 TPP2P29144 1249 aaPredicted RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 SSRP1Q08945 709 aaKnown RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 CWF19L1Q69YN2 538 aaKnown RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 LRRN4CLQ8ND94 238 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 BRF1Q92994 677 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 UBE2FQ969M7 185 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 SPATA9Q9BWV2 254 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 APEX2Q9UBZ4 518 aa6.72□□□□□ -1.33
SQLE-202ENST00000518604 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
SQLE-202ENST00000518604 ITGAVP06756 1048 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 ITGB7P26010 798 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 BMP8BP34820 402 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 NOP2P46087 812 aaKnown RBP6.71□□□□□ -1.34
SQLE-202ENST00000518604 POU4F1Q01851 419 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 HSP90AA2PQ14568 343 aaPredicted RBP6.71□□□□□ -1.34
SQLE-202ENST00000518604 AOC3Q16853 763 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 RNF111Q6ZNA4 994 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 SPATC1Q76KD6 591 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 THAP3Q8WTV1 239 aaPredicted RBP6.71□□□□□ -1.34
SQLE-202ENST00000518604 PPP1R14AQ96A00 147 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 TCTN2Q96GX1 697 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 MRGPRX3Q96LB0 322 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 NOL6Q9H6R4 1146 aaKnown RBP6.71□□□□□ -1.34
SQLE-202ENST00000518604 CWC22Q9HCG8 908 aaKnown RBP6.71□□□□□ -1.34
SQLE-202ENST00000518604 LMCD1Q9NZU5 365 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 KDM2BQ8NHM5 1336 aa6.71□□□□□ -1.34
SQLE-202ENST00000518604 A0A1W2PQU0 124 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 CD97P48960 835 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 PCBP3P57721 371 aaKnown RBP6.7□□□□□ -1.34
SQLE-202ENST00000518604 GIMAP6Q6P9H5 292 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 ZNF227Q86WZ6 799 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 DTX1Q86Y01 620 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 LILRB2Q8N423 598 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 ZBTB38Q8NAP3 1195 aaPredicted RBP6.7□□□□□ -1.34
SQLE-202ENST00000518604 ADCY4Q8NFM4 1077 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 DUSP13Q9UII6 198 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
SQLE-202ENST00000518604 CCDC163A0A0D9SF12 145 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 KIAA1324LA8MWY0 1029 aaPredicted RBP6.69□□□□□ -1.34
SQLE-202ENST00000518604 CAPNS1P04632 268 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 CTSKP43235 329 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 AMPD2Q01433 879 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 PPP2R5DQ14738 602 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 VSIG10LQ86VR7 867 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 USHBP1Q8N6Y0 703 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 BCL7CQ8WUZ0 217 aaPredicted RBP6.69□□□□□ -1.34
SQLE-202ENST00000518604 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 ATP13A1Q9HD20 1204 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 SLC5A6Q9Y289 635 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 TBX22Q9Y458 520 aa6.69□□□□□ -1.34
SQLE-202ENST00000518604 TRAV20A0A0B4J274 112 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 H0Y8X5 98 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 RBAK-RBAKDNI3L0D1 243 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 ADCY3O60266 1144 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 DIAPH1O60610 1272 aaKnown RBP6.68□□□□□ -1.34
SQLE-202ENST00000518604 VAV1P15498 845 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 SPINK2P20155 84 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 HOXC12P31275 282 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 PPP2R2AP63151 447 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 CREG2Q8IUH2 290 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
SQLE-202ENST00000518604 ZDHHC15Q96MV8 337 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 AARSD1Q9BTE6 412 aaKnown RBP6.68□□□□□ -1.34
SQLE-202ENST00000518604 CYP26B1Q9NR63 512 aa6.68□□□□□ -1.34
SQLE-202ENST00000518604 ZNF205O95201 554 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 KCNH1O95259 989 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 ESR1P03372 595 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 FGFR1P11362 822 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 LTKP29376 864 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 GTF2IRD2BQ6EKJ0 949 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 GTF2IRD2Q86UP8 949 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 SH3TC2Q8TF17 1288 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 IPO9Q96P70 1041 aaKnown RBP6.67□□□□□ -1.34
SQLE-202ENST00000518604 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 TCFL5Q9UL49 500 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 MINPP1Q9UNW1 487 aa6.67□□□□□ -1.34
SQLE-202ENST00000518604 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 MEIS1O00470 390 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 MED26O95402 600 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 CPP00450 1065 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 SCG5P05408 212 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms