RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 HOMER2Q9NSB8 354 aa12.52□□□□□ -0.41
SPIDR-205ENST00000518060 FEM1BQ9UK73 627 aa12.52□□□□□ -0.41
SPIDR-205ENST00000518060 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-205ENST00000518060 ZMYND8Q9ULU4 1186 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-205ENST00000518060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
SPIDR-205ENST00000518060 TMEM232C9JQI7 657 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 MSCO60682 206 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 HSPD1P10809 573 aaKnown RBP12.51□□□□□ -0.41
SPIDR-205ENST00000518060 CYBAP13498 195 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 MCCP23508 829 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 LHX8Q68G74 356 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 TRPV1Q8NER1 839 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 REPS2Q8NFH8 660 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 MKL1Q969V6 931 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 ADAMTS5Q9UNA0 930 aa12.51□□□□□ -0.41
SPIDR-205ENST00000518060 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-205ENST00000518060 FGAP02671 866 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 STAT2P52630 851 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 ALX1Q15699 326 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 ZNF236Q9UL36 1845 aa12.5□□□□□ -0.41
SPIDR-205ENST00000518060 RLFQ13129 1914 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 PFASO15067 1338 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 HIP1O00291 1037 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 ORC4O43929 436 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 SYN1P17600 705 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-205ENST00000518060 GJC2Q5T442 439 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-205ENST00000518060 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 RASGRP2Q7LDG7 609 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 FAM160B2Q86V87 743 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 TICAM2Q86XR7 235 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 CHURC1Q8WUH1 139 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 GMCL1Q96IK5 515 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-205ENST00000518060 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 TACC3Q9Y6A5 838 aa12.49□□□□□ -0.41
SPIDR-205ENST00000518060 TRIOBPQ9H2D6 2365 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 FRMPD2Q68DX3 1309 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-205ENST00000518060 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 SEPT4O43236 478 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-205ENST00000518060 SNAP25P60880 206 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 ARRDC4Q8NCT1 418 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 STAG1Q8WVM7 1258 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 TINF2Q9BSI4 451 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-205ENST00000518060 IL17RBQ9NRM6 502 aa12.48□□□□□ -0.41
SPIDR-205ENST00000518060 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
SPIDR-205ENST00000518060 ZHX1Q9UKY1 873 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-205ENST00000518060 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 DNM1LO00429 736 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 ZNF213O14771 459 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 TOP1P11387 765 aaKnown RBP12.47□□□□□ -0.41
SPIDR-205ENST00000518060 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 RNF146Q9NTX7 359 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 MYH4Q9Y623 1939 aa12.47□□□□□ -0.41
SPIDR-205ENST00000518060 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-205ENST00000518060 PARP14Q460N5 1801 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 NEDD4P46934 1319 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 ATP2A1O14983 1001 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 FDX1P10109 184 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 RARBP10826 455 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 COL6A1P12109 1028 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 ALAS1P13196 640 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-205ENST00000518060 PDE4AP27815 886 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 OAZ1P54368 228 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 RCSD1Q6JBY9 416 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 CHST13Q8NET6 341 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 ESR2Q92731 530 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 LENG1Q96BZ8 264 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-205ENST00000518060 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 ACAD9Q9H845 621 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 XPNPEP3Q9NQH7 507 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 PRR12Q9ULL5 1215 aa12.46□□□□□ -0.41
SPIDR-205ENST00000518060 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
SPIDR-205ENST00000518060 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
SPIDR-205ENST00000518060 AKR1A1P14550 325 aa12.45□□□□□ -0.42
SPIDR-205ENST00000518060 SLC16A2P36021 539 aa12.45□□□□□ -0.42
SPIDR-205ENST00000518060 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms