RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 SLC39A5Q6ZMH5 540 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 GPR142Q7Z601 462 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 CCAR1Q8IX12 1150 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 P2RX7Q99572 595 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 APBA2Q99767 749 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 C1QTNF2Q9BXJ5 285 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 DDX4Q9NQI0 724 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 MORF4L1Q9UBU8 362 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 DDX20Q9UHI6 824 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 MROH5Q6ZUA9 1318 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 APAF1O14727 1248 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 VSIG8P0DPA2 414 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 CYP2C19P33261 490 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 PABPC4Q13310 644 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00535-202ENST00000517785 TMEM31Q5JXX7 168 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 MFSD14CQ5VZR4 134 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 CCDC129Q6ZRS4 1044 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 PLEKHH3Q7Z736 793 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 TRMT44Q8IYL2 757 aaKnown RBP7.08□□□□□ -1.28
LINC00535-202ENST00000517785 ZNF280CQ8ND82 737 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 ARMC2Q8NEN0 867 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 TRPV1Q8NER1 839 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 GPRC5AQ8NFJ5 357 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 KLHDC4Q8TBB5 520 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 LPAR1Q92633 364 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 USP6NLQ92738 828 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 ADAMTS8Q9UP79 889 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 GBF1Q92538 1859 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 SMCHD1A6NHR9 2005 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 ZDBF2Q9HCK1 2354 aa7.08□□□□□ -1.28
LINC00535-202ENST00000517785 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 KBTBD13C9JR72 458 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 GRM8O00222 908 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 MAPK4P31152 587 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 ADCYAP1R1P41586 468 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 HERVK_113P62684 666 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 ERVK-24P63145 666 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 TLE2Q04725 743 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 RRP1BQ14684 758 aaKnown RBP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 SKIV2LQ15477 1246 aaKnown RBP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 TWISTNBQ3B726 338 aaPredicted RBP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 AKNAD1Q5T1N1 836 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 BEND3Q5T5X7 828 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 VGLL2Q8N8G2 317 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 PBX4Q9BYU1 374 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00535-202ENST00000517785 RBPJLQ9UBG7 517 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 REV3LO60673 3130 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 RFX7Q2KHR2 1363 aa7.07□□□□□ -1.28
LINC00535-202ENST00000517785 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 MAN1A2O60476 641 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 PQBP1O60828 265 aaKnown RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 ENTPD3O75355 529 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 LDHBP07195 334 aaKnown RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 RAG1P15918 1043 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 FSHRP23945 695 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 MRE11P49959 708 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 ATP2B2Q01814 1243 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 CALD1Q05682 793 aaKnown RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 FPGSQ05932 587 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 SHROOM1Q2M3G4 852 aaPredicted RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 NPLOC4Q8TAT6 608 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 WDR66Q8TBY9 1149 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 EDC3Q96F86 508 aaKnown RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 KAZALD1Q96I82 304 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 IDI2Q9BXS1 227 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 SLC24A3Q9HC58 644 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 C11orf16Q9NQ32 467 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
LINC00535-202ENST00000517785 MAP4K5Q9Y4K4 846 aa7.06□□□□□ -1.28
LINC00535-202ENST00000517785 LRRC37A2A6NM11 1700 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 USP17L5A8MUK1 530 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 UPP2O95045 317 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 PDE8BO95263 885 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 CLTBP09497 229 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 IFIT1P09914 478 aaKnown RBP7.05□□□□□ -1.28
LINC00535-202ENST00000517785 BMP2P12643 396 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 BTDP43251 543 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 CLK2P49760 499 aaKnown RBP7.05□□□□□ -1.28
LINC00535-202ENST00000517785 MAP3K10Q02779 954 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 SNX17Q15036 470 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
LINC00535-202ENST00000517785 SLC4A10Q6U841 1118 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 VASH1Q7L8A9 365 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-202ENST00000517785 NKX2-4Q9H2Z4 354 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 TMOD4Q9NZQ9 345 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 CXXC1Q9P0U4 656 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-202ENST00000517785 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 CHD9Q3L8U1 2897 aa7.05□□□□□ -1.28
LINC00535-202ENST00000517785 UTYO14607 1347 aa7.04□□□□□ -1.28
LINC00535-202ENST00000517785 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
LINC00535-202ENST00000517785 MSCO60682 206 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms