RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPARAQ07869 468 aa13.88□□□□□ -0.19
PCM1-203ENST00000517545 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
PCM1-203ENST00000517545 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
PCM1-203ENST00000517545 GOLGA6BA6NDN3 693 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 COL18A1P39060 1754 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 CHD4Q14839 1912 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 CPP00450 1065 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 PIK3AP1Q6ZUJ8 805 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 LPIN2Q92539 896 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 BAZ2BQ9UIF8 2168 aaKnown RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 PCDH11YQ9BZA8 1340 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 FGFR2P21802 821 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 CKAP4Q07065 602 aaKnown RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
PCM1-203ENST00000517545 CAPN11Q9UMQ6 739 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
PCM1-203ENST00000517545 B4DLN1 442 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 IDEP14735 1019 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 SND1Q7KZF4 910 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCM1-203ENST00000517545 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 KRT86O43790 486 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 BMP15O95972 392 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 EIF5P55010 431 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 DMGDHQ9UI17 866 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 FAM169AQ9Y6X4 670 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 SOS2Q07890 1332 aaPredicted RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 CYP2D7A0A087X1C5 515 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 H7C1D1 291 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 GIGYF2Q6Y7W6 1299 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
PCM1-203ENST00000517545 AENQ8WTP8 325 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 TRMT112Q9UI30 125 aaKnown RBP13.86□□□□□ -0.19
PCM1-203ENST00000517545 TIAM2Q8IVF5 1701 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 RCAN1P53805 252 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 NHEJ1Q9H9Q4 299 aaPredicted RBP13.85□□□□□ -0.19
PCM1-203ENST00000517545 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 SMARCAL1Q9NZC9 954 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 MYH6P13533 1939 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 UBR2Q8IWV8 1755 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 GRIN2DO15399 1336 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 BCAMP50895 628 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 KRT83P78385 493 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 SLC7A5Q01650 507 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 KRT26Q7Z3Y9 468 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 RPGRIP1Q96KN7 1286 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 LRRC1Q9BTT6 524 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 RNF41Q9H4P4 317 aaPredicted RBP13.85□□□□□ -0.19
PCM1-203ENST00000517545 YY1AP1Q9H869 796 aa13.85□□□□□ -0.19
PCM1-203ENST00000517545 ERLIN2O94905 339 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 ATF3P18847 181 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCM1-203ENST00000517545 GNGT1P63211 74 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 MEA1Q16626 185 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PSMB7Q99436 277 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PLIN2Q99541 437 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 CAPS2Q9BXY5 557 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 FAM184BQ9ULE4 1060 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PDS5AQ29RF7 1337 aaKnown RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 NKRFO15226 690 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCM1-203ENST00000517545 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 FBXW10Q5XX13 1052 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 MMS22LQ6ZRQ5 1243 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 TOM1L2Q6ZVM7 507 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 ESR2Q92731 530 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 DEF6Q9H4E7 631 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 ASAP1Q9ULH1 1129 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 RTL9Q8NET4 1388 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 A0A1W2PQC6 194 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 EBAG9O00559 213 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 ZNF263O14978 683 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 PLEKP08567 350 aaPredicted RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 PPFIA1Q13136 1202 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 IFIT1BQ5T764 474 aaKnown RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 ZSCAN10Q96SZ4 725 aaPredicted RBP13.84□□□□□ -0.19
PCM1-203ENST00000517545 TTYH3Q9C0H2 523 aa13.84□□□□□ -0.19
PCM1-203ENST00000517545 RMND1Q9NWS8 449 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms