RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
PDGFRB-202ENST00000517488 RAD50Q92878 1312 aa16.64■□□□□ 0.25
PDGFRB-202ENST00000517488 A0A0G2JMZ2 1700 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 ZBED4O75132 1171 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 IGHA2P01877 340 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 FCER1AP12319 257 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 PTH1RQ03431 593 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 UBE2Q1Q7Z7E8 422 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 RAVER2Q9HCJ3 691 aaKnown RBP16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 RBBP6Q7Z6E9 1792 aaKnown RBP16.63■□□□□ 0.25
PDGFRB-202ENST00000517488 SGSM2O43147 1006 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 CCND3P30281 292 aaPredicted RBP16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 CYP2C19P33261 490 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 RUFY2Q8WXA3 655 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 ESR2Q92731 530 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 MMP19Q99542 508 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
PDGFRB-202ENST00000517488 B4E1Z4 1266 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 ATP2A1O14983 1001 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 KDM4AO75164 1064 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 PGK2P07205 417 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 COPB2P35606 906 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 SLC4A3P48751 1232 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 STAT2P52630 851 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 CHURC1Q8WUH1 139 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 CTDP1Q9Y5B0 961 aaPredicted RBP16.61■□□□□ 0.25
PDGFRB-202ENST00000517488 PLA2G6O60733 806 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 SNAP25P60880 206 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 CCDC96Q2M329 555 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 OLFML2BQ68BL8 750 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 TTBK2Q6IQ55 1244 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 TRPV1Q8NER1 839 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 TTC14Q96N46 770 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
PDGFRB-202ENST00000517488 KCTD2Q14681 263 aa16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 LHX8Q68G74 356 aa16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 DIS3LQ8TF46 1054 aaKnown RBP16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 PRR12Q9ULL5 1215 aa16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
PDGFRB-202ENST00000517488 FDX1P10109 184 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 PDHBP11177 359 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 SLC16A2P36021 539 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 NT5C2P49902 561 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 OAZ1P54368 228 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 ZNF792Q3KQV3 632 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 KRT23Q9C075 422 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 ZNF536O15090 1300 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 MYH4Q9Y623 1939 aa16.58■□□□□ 0.24
PDGFRB-202ENST00000517488 CYP21A2P08686 494 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 CYBAP13498 195 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 CAPN2P17655 700 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 PRAMEF19Q5SWL8 479 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 BTNL9Q6UXG8 535 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
PDGFRB-202ENST00000517488 SNHG28P0DPA3 235 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 CNGA1P29973 690 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 BMP2KLQ5H9B9 411 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 CHST13Q8NET6 341 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
PDGFRB-202ENST00000517488 TNKSO95271 1327 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 DNAJC25-GNG10A0A024R161 153 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 SYDE2Q5VT97 1194 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 ANKLE1Q8NAG6 615 aa16.55■□□□□ 0.24
PDGFRB-202ENST00000517488 PNMA1Q8ND90 353 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms