RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 FLOT1O75955 427 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 ALAS1P13196 640 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 TBCKQ8TEA7 893 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 TBC1D5Q92609 795 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 PSMD1Q99460 953 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 KCNH3Q9ULD8 1083 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 UBA7P41226 1012 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SHISA4Q96DD7 197 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 PSTPIP2Q9H939 334 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 RCOR1Q9UKL0 485 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 AKAP11Q9UKA4 1901 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 BMP3P12645 472 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 EVCP57679 992 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SUGT1Q9Y2Z0 365 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 GRM4Q14833 912 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 FILIP1Q7Z7B0 1213 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 TICAM2Q86XR7 235 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 NOC3LQ8WTT2 800 aaKnown RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SWAP70Q9UH65 585 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 CENPFP49454 3210 aa11.12□□□□□ -0.63
EFCAB13-203ENST00000517484 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 IDEP14735 1019 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 MTMR2Q13614 643 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 SLC39A14Q15043 492 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CDC37Q16543 378 aaPredicted RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 LONRF3Q496Y0 759 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CDK5RAP3Q96JB5 506 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 YBX3P16989 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 HMGCS2P54868 508 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 FAM160A1Q05DH4 1040 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 TMEM179Q6ZVK1 233 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 WNK3Q9BYP7 1800 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 LMNB1P20700 586 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 ADCY7P51828 1080 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
EFCAB13-203ENST00000517484 SMC2O95347 1197 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 TDP2O95551 362 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 CALML3P27482 149 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 ZNF543Q08ER8 600 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 DDX19AQ9NUU7 478 aaKnown RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 WDR19Q8NEZ3 1342 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 GNA11P29992 359 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 PRR16Q569H4 304 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 MAP1SQ66K74 1059 aaPredicted RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 AOPEPQ8N6M6 819 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 SYMPKQ92797 1274 aaKnown RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 RAVER2Q9HCJ3 691 aaKnown RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 DNTTIP2Q5QJE6 756 aaKnown RBP11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 SH2D3AQ9BRG2 576 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 TMEM60Q9H2L4 133 aa11.1□□□□□ -0.63
EFCAB13-203ENST00000517484 ANKRD36CQ5JPF3 1778 aa11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 COL5A3P25940 1745 aaPredicted RBP11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 GABPAQ06546 454 aa11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 NONOQ15233 471 aaKnown RBP eCLIP11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
EFCAB13-203ENST00000517484 MAEAQ7L5Y9 396 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms