RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 HTRA3P83110 453 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 RBM10P98175 930 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GSTM4Q03013 218 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 UBAP2LQ14157 1087 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PRSS53Q2L4Q9 553 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 INAVAQ3KP66 663 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EFHC2Q5JST6 749 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CYB5RLQ6IPT4 315 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 UBE2R2Q712K3 238 aaPredicted RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FKBP9P1Q75LS8 142 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 HDXQ7Z353 690 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ADAT2Q7Z6V5 191 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SRLQ86TD4 932 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PNMA8AQ86V59 439 aaPredicted RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CMIPQ8IY22 773 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PHACTR4Q8IZ21 702 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 IFNL2Q8IZJ0 200 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PDILTQ8N807 584 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GJA10Q969M2 543 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 RUNDC1Q96C34 613 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 WDR89Q96FK6 387 aaPredicted RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 WNK4Q96J92 1243 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MRGPRX3Q96LB0 322 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NAA15Q9BXJ9 866 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SPTLC3Q9NUV7 552 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DNAJB12Q9NXW2 375 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MARK1Q9P0L2 795 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SAMD15Q9P1V8 674 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GTF2IRD1Q9UHL9 959 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PNMA8BQ9ULN7 279 aaPredicted RBP3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DNM3Q9UQ16 869 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DMTF1Q9Y222 760 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGC4Q9Y5F7 938 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGB3Q9Y5G1 929 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHA9Q9Y5H5 950 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SNCAIPQ9Y6H5 919 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SCINQ9Y6U3 715 aa3.36□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TTLL8A6PVC2 850 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PRSS47A8MTI9 375 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 WDR64B1ANS9 1081 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 F5H423 210 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TNFRSF10AO00220 468 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CAPN5O15484 640 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BNIP3LO60238 219 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA12O60330 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EFCAB14O75071 495 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 UBOX5O94941 541 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 UPP2O95045 317 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 IL33O95760 270 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 LTFP02788 710 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SOD2P04179 222 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NAT2P11245 290 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 COL6A1P12109 1028 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PHKG2P15735 406 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PTPRAP18433 802 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EPHA1P21709 976 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CYP2C19P33261 490 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MAN1A1P33908 653 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FLT3P36888 993 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SARSP49591 514 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ADCY1Q08828 1119 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 KLF1Q13351 362 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 AP3B2Q13367 1082 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 IKBKEQ14164 716 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 LONRF1Q17RB8 773 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TUBB8Q3ZCM7 444 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ATP13A4Q4VNC1 1196 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ALFQ53S48 1182 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TMEM201Q5SNT2 666 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GPR158Q5T848 1215 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CCDC70Q6NSX1 233 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZCCHC8Q6NZY4 707 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PGM2L1Q6PCE3 622 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 KCNT2Q6UVM3 1135 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 RIPOR1Q6ZS17 1223 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CYFIP1Q7L576 1253 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZNF354CQ86Y25 554 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CMTR2Q8IYT2 770 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CLASRPQ8N2M8 674 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TEX19Q8NA77 164 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SMC1BQ8NDV3 1235 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BVESQ8NE79 360 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 C1orf162Q8NEQ5 155 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BAHD1Q8TBE0 780 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CHTF18Q8WVB6 975 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 POF1BQ8WVV4 589 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TRMT2BQ96GJ1 504 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ABHD17AQ96GS6 310 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 AHCYL2Q96HN2 611 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FAXDC2Q96IV6 333 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MAGEB10Q96LZ2 347 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SCLT1Q96NL6 688 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TRERF1Q96PN7 1200 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CDC5LQ99459 802 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DPH2Q9BQC3 489 aaPredicted RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 HERPUD2Q9BSE4 406 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MENTQ9BUN1 341 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 UBE2OQ9C0C9 1292 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TCF7L1Q9HCS4 588 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms