RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 AURKAIP1Q9NWT8 199 aaPredicted RBP0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CEP126Q9P2H0 1117 aa0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EBF1Q9UH73 591 aa0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CHIC2Q9UKJ5 165 aa0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FNDC3AQ9Y2H6 1198 aaKnown RBP0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KCNMB2Q9Y691 235 aa0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 GPR98Q8WXG9 6306 aa0.04□□□□□ -2.4
RNU6-1238P-201ENST00000517215 COL2A1P02458 1487 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EME2A4GXA9 379 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NUDT19A8MXV4 375 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SEMA3EO15041 775 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RBMXL2O75526 392 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MICAL2O94851 1124 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 BAG4O95429 457 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CELA3AP09093 270 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SNHG28P0DPA3 235 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RPL13P26373 211 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ARL4AP40617 200 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ELLP55199 621 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NHLH1Q02575 133 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TNK2Q07912 1038 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 AGBL4Q5VU57 503 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MYSM1Q5VVJ2 828 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SMYD5Q6GMV2 418 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TCTN3Q6NUS6 607 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RPTNQ6XPR3 784 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NCAPG2Q86XI2 1143 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TNS4Q8IZW8 715 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PHTF2Q8N3S3 785 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 STAG2Q8N3U4 1231 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TMEM102Q8N9M5 508 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TXNDC5Q8NBS9 432 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FAM98AQ8NCA5 519 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PDPRQ8NCN5 879 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 COX4I2Q96KJ9 171 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PTPN18Q99952 460 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CORO1BQ9BR76 489 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 G6PC3Q9BUM1 346 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TSPAN10Q9H1Z9 355 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TOR3AQ9H497 397 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RSAD1Q9HA92 442 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TNFRSF12AQ9NP84 129 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KMT5AQ9NQR1 393 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CEP72Q9P209 647 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SLAIN2Q9P270 581 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 DUSP13Q9UII6 198 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ICKQ9UPZ9 632 aa0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CCDC9Q9Y3X0 531 aaKnown RBP0.03□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 WDR91A4D1P6 747 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GRID2IPA4D2P6 1211 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CGB1A6NKQ9 187 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TNFRSF13BO14836 293 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SMARCA5O60264 1052 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 USP2O75604 605 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NCAM1P13591 858 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ACO1P21399 889 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TPP2P29144 1249 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KIR2DL1P43626 348 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KIR2DL2P43627 348 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KIR3DL1P43629 444 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 POLGP54098 1239 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LAPTM5Q13571 262 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PDE3AQ14432 1141 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NR1I3Q14994 352 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NAALADL2Q58DX5 795 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MCTP2Q6DN12 878 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 Q6ZSN1 163 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 C18orf65Q6ZTR6 163 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 Q7L0L9 218 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SERINC5Q86VE9 423 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CMTR1Q8N1G2 835 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LINC00482Q8N8I6 264 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 BOLLQ8N9W6 283 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SERBP1Q8NC51 408 aaKnown RBP eCLIP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KCNV2Q8TDN2 545 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZBTB8AQ96BR9 441 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MBD6Q96DN6 1003 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZNF48Q96MX3 618 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NOX5Q96PH1 765 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TRIM56Q9BRZ2 755 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TRIT1Q9H3H1 467 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SSU72Q9NP77 194 aaKnown RBP0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 DZANK1Q9NVP4 752 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PROCRQ9UNN8 238 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZNF281Q9Y2X9 895 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 INSL6Q9Y581 213 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PCDHGC5Q9Y5F6 944 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PCDHGA11Q9Y5H2 935 aa0.02□□□□□ -2.41
RNU6-1238P-201ENST00000517215 COL11A2P13942 1736 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 POLR2AP24928 1970 aaKnown RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 WASH4PA8MWX3 477 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PPP1R12BO60237 982 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ECEL1O95672 775 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SLFN14P0C7P3 912 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PTGS2P35354 604 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 THBS2P35442 1172 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MC3RP41968 323 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CLK2P49760 499 aaKnown RBP0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms