RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SPINK6Q6UWN8 80 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 BRD3OSQ6XYD6 125 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RNF111Q6ZNA4 994 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 LIAT1Q6ZQX7 453 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PRR23BQ6ZRT6 265 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 Q6ZSN1 163 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IL17RELQ6ZVW7 336 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 DGLUCYQ7Z3D6 616 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PRICKLE2Q7Z3G6 844 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PLEKHH3Q7Z736 793 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 MRGPRGQ86SM5 289 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PEG10Q86TG7 708 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ATG4DQ86TL0 474 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 FERMT3Q86UX7 667 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ARHGEF25Q86VW2 580 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ADGRG3Q86Y34 549 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 KIF18BQ86Y91 864 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZDHHC17Q8IUH5 632 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NUTM2AQ8IVF1 878 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TMEFF1Q8IYR6 380 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 DCP1BQ8IZD4 617 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 CYP4X1Q8N118 509 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 FBXL6Q8N531 539 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TTC9BQ8N6N2 239 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF655Q8N720 491 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 JMYQ8N9B5 988 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 KLHL23Q8NBE8 558 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TMEM52Q8NDY8 209 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ACRBPQ8NEB7 543 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NFAM1Q8NET5 270 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 FBXO18Q8NFZ0 1043 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF417Q8TAU3 575 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RIN3Q8TB24 985 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NETO1Q8TDF5 533 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 MORC4Q8TE76 937 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 LRRN4Q8WUT4 740 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF296Q8WUU4 475 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NANOS1Q8WY41 292 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ROBO4Q8WZ75 1007 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF516Q92618 1163 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 STAMQ92783 540 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 JARID2Q92833 1246 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 HPS1Q92902 700 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 CLP1Q92989 425 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 BHMTQ93088 406 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SARAFQ96BY9 339 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PAWRQ96IZ0 340 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 LOXL4Q96JB6 756 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IFT74Q96LB3 600 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 FGD4Q96M96 766 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF285Q96NJ3 590 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF587Q96SQ5 575 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RBM15Q96T37 977 aaKnown RBP eCLIP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PRRX2Q99811 253 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ARID3AQ99856 593 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PRR14Q9BWN1 585 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RAB33BQ9H082 229 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RNF208Q9H0X6 261 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF106Q9H2Y7 1883 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF696Q9H7X3 374 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 VPS37BQ9H9H4 285 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SEBOXQ9HB31 216 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IL21RQ9HBE5 538 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NCKAP5LQ9HCH0 1330 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 RPS10P5Q9NQ39 176 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TNFRSF19Q9NS68 423 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 BMP2KQ9NSY1 1161 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 GJB4Q9NTQ9 266 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PLAC8Q9NZF1 115 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NOP53Q9NZM5 478 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SCHIP1Q9P0W5 487 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 CCDC39Q9UFE4 941 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 DNAH17Q9UFH2 4485 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SALL4Q9UJQ4 1053 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ADAMTS6Q9UKP5 1117 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ANGEL1Q9UNK9 670 aaKnown RBP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PLCL2Q9UPR0 1127 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 NEU3Q9UQ49 428 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PTPN22Q9Y2R2 807 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ZNF451Q9Y4E5 1061 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PCDHGC4Q9Y5F7 938 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ST14Q9Y5Y6 855 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 U3KQA8 63 aa-0.51□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PKDREJQ9NTG1 2253 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 DNAH9Q9NYC9 4486 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TET1Q8NFU7 2136 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SCN5AQ14524 2016 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TANC2Q9HCD6 1990 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 LRP4O75096 1905 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 USP34Q70CQ2 3546 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 WDFY3Q8IZQ1 3526 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 PCNTO95613 3336 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IGF1RP08069 1367 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 ASTN1O14525 1302 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 SOS1Q07889 1333 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IGKV1D-17A0A075B6S4 117 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IGKV1D-8A0A087WSZ0 117 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 IGKV1-6A0A0C4DH72 117 aa-0.52□□□□□ -2.49
SCARNA20.2-201ENST00000516052 TMEM269A0A1B0GVZ9 245 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms