RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 C6orf50Q9HD87 102 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 PCDHB6Q9Y5E3 794 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 F5H6K3 240 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 GNA11P29992 359 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 SLC1A4P43007 532 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 KLRC3Q07444 240 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 SNW1Q13573 536 aaKnown RBP23.05■■□□□ 1.28
TRIO-223ENST00000515710 MAP3K11Q16584 847 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 ADGRF4Q8IZF3 695 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 JMJD4Q9H9V9 463 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 ARHGEF10LQ9HCE6 1279 aa23.05■■□□□ 1.28
TRIO-223ENST00000515710 PNMA6FA0A0J9YX94 578 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 ESYT2A0FGR8 921 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 M0R2N6 131 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 CTAGE5O15320 804 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 KCTD1Q719H9 257 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 KRI1Q8N9T8 703 aaKnown RBP23.04■■□□□ 1.28
TRIO-223ENST00000515710 ZBTB21Q9ULJ3 1066 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
TRIO-223ENST00000515710 TTBK2Q6IQ55 1244 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 RBM43Q6ZSC3 357 aaKnown RBP23.04■■□□□ 1.28
TRIO-223ENST00000515710 PIK3AP1Q6ZUJ8 805 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 MIGA2Q7L4E1 593 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
TRIO-223ENST00000515710 BAZ2BQ9UIF8 2168 aaKnown RBP23.03■■□□□ 1.28
TRIO-223ENST00000515710 FAM205CA6NFA0 338 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 KINO60870 393 aaKnown RBP23.03■■□□□ 1.28
TRIO-223ENST00000515710 ATP2B1P20020 1258 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 CAP2P40123 477 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 CDAN1Q8IWY9 1227 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 FMR1NBQ8N0W7 255 aaPredicted RBP23.03■■□□□ 1.28
TRIO-223ENST00000515710 TEPSINQ96N21 525 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 PCDHA6Q9UN73 950 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 PCDHA8Q9Y5H6 950 aa23.03■■□□□ 1.28
TRIO-223ENST00000515710 SMCO2A6NFE2 343 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 PTPREP23469 700 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 TTC38Q5R3I4 469 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 PPP1R18Q6NYC8 613 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 GPRC5DQ9NZD1 345 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
TRIO-223ENST00000515710 FAM237AA0A1B0GTK4 181 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 A0A1B0GVL5 298 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 RAD21O60216 631 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 NDUFB10O96000 172 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 CAMK4Q16566 473 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 RBSNQ9H1K0 784 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 GINM1Q9NU53 330 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 TMX2Q9Y320 296 aa23.02■■□□□ 1.28
TRIO-223ENST00000515710 SRPRBQ9Y5M8 271 aaKnown RBP23.02■■□□□ 1.28
TRIO-223ENST00000515710 CCDC194A0A1B0GVG4 234 aa23.01■■□□□ 1.27
TRIO-223ENST00000515710 ZBTB5O15062 677 aa23.01■■□□□ 1.27
TRIO-223ENST00000515710 NDUFA8P51970 172 aa23.01■■□□□ 1.27
TRIO-223ENST00000515710 ZNF579Q8NAF0 562 aaKnown RBP23.01■■□□□ 1.27
TRIO-223ENST00000515710 FUCA2Q9BTY2 467 aa23.01■■□□□ 1.27
TRIO-223ENST00000515710 FBXO2Q9UK22 296 aaPredicted RBP23.01■■□□□ 1.27
TRIO-223ENST00000515710 A0A1W2PRG0 241 aa23■■□□□ 1.27
TRIO-223ENST00000515710 BMP3P12645 472 aa23■■□□□ 1.27
TRIO-223ENST00000515710 SLC16A2P36021 539 aa23■■□□□ 1.27
TRIO-223ENST00000515710 NOM1Q5C9Z4 860 aaKnown RBP23■■□□□ 1.27
TRIO-223ENST00000515710 RESP18Q5W5W9 173 aa23■■□□□ 1.27
TRIO-223ENST00000515710 APOBEC3FQ8IUX4 373 aaKnown RBP23■■□□□ 1.27
TRIO-223ENST00000515710 SH2D4AQ9H788 454 aa23■■□□□ 1.27
TRIO-223ENST00000515710 ADAMTS3O15072 1205 aa23■■□□□ 1.27
TRIO-223ENST00000515710 ASNSP08243 561 aa23■■□□□ 1.27
TRIO-223ENST00000515710 SHC4Q6S5L8 630 aa23■■□□□ 1.27
TRIO-223ENST00000515710 KRT25Q7Z3Z0 450 aa23■■□□□ 1.27
TRIO-223ENST00000515710 DEFB129Q9H1M3 183 aa23■■□□□ 1.27
TRIO-223ENST00000515710 GOPCQ9HD26 462 aa23■■□□□ 1.27
TRIO-223ENST00000515710 HPSEQ9Y251 543 aa23■■□□□ 1.27
TRIO-223ENST00000515710 USP17L10C9JJH3 530 aa22.99■■□□□ 1.27
TRIO-223ENST00000515710 CCDC192P0DO97 292 aa22.99■■□□□ 1.27
TRIO-223ENST00000515710 PFKFB1P16118 471 aa22.99■■□□□ 1.27
TRIO-223ENST00000515710 HOOK2Q96ED9 719 aa22.99■■□□□ 1.27
TRIO-223ENST00000515710 CLIC6Q96NY7 704 aa22.99■■□□□ 1.27
TRIO-223ENST00000515710 PHF20L1A8MW92 1017 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 ZNF174Q15697 407 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 BTNL9Q6UXG8 535 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 ASTN2O75129 1339 aaPredicted RBP22.98■■□□□ 1.27
TRIO-223ENST00000515710 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 COA7Q96BR5 231 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 TIGD1Q96MW7 591 aa22.98■■□□□ 1.27
TRIO-223ENST00000515710 ZNF202O95125 648 aa22.97■■□□□ 1.27
TRIO-223ENST00000515710 RASGRP4Q8TDF6 673 aa22.97■■□□□ 1.27
TRIO-223ENST00000515710 RTN4Q9NQC3 1192 aaKnown RBP22.97■■□□□ 1.27
TRIO-223ENST00000515710 FAM13BQ9NYF5 915 aa22.97■■□□□ 1.27
TRIO-223ENST00000515710 ECE1P42892 770 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 SYKP43405 635 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 ADCY7P51828 1080 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 ATP2C1P98194 919 aaPredicted RBP22.96■■□□□ 1.27
TRIO-223ENST00000515710 ACER1Q8TDN7 264 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 SCAF8Q9UPN6 1271 aaKnown RBP22.96■■□□□ 1.27
TRIO-223ENST00000515710 NONOQ15233 471 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRIO-223ENST00000515710 SYDE2Q5VT97 1194 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 CKAP2LQ8IYA6 745 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 GLT8D2Q9H1C3 349 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 VCPKMTQ9H867 229 aa22.96■■□□□ 1.27
TRIO-223ENST00000515710 RNF181Q9P0P0 153 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms