RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 CLCQ05315 142 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 CDCP2Q5VXM1 449 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 NLRC3Q7RTR2 1065 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 LINC00116Q8NCU8 138 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 GIPC2Q8TF65 315 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 CNNM2Q9H8M5 875 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
LINC01088-211ENST00000515597 VIPR1P32241 457 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 ZNF385BQ569K4 471 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 TMCO4Q5TGY1 634 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 PANK1Q8TE04 598 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 ZCCHC4Q9H5U6 513 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 EHMT1Q9H9B1 1298 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 CRTAC1Q9NQ79 661 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 GGT7Q9UJ14 662 aa6.96□□□□□ -1.3
LINC01088-211ENST00000515597 GPR55Q9Y2T6 319 aaPredicted RBP6.96□□□□□ -1.3
LINC01088-211ENST00000515597 RFXAPO00287 272 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 RTP1P59025 263 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 TCERG1LQ5VWI1 586 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 TMEM192Q8IY95 271 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 FCRL2Q96LA5 508 aaPredicted RBP6.95□□□□□ -1.3
LINC01088-211ENST00000515597 MKRN2Q9H000 416 aaKnown RBP6.95□□□□□ -1.3
LINC01088-211ENST00000515597 CHST7Q9NS84 486 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 SIRT5Q9NXA8 310 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 GFOD1Q9NXC2 390 aa6.95□□□□□ -1.3
LINC01088-211ENST00000515597 TRIM13O60858 407 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 PNLIPP16233 465 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 MCM4P33991 863 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 RAD51AP2Q09MP3 1159 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 HSF5Q4G112 596 aaPredicted RBP6.94□□□□□ -1.3
LINC01088-211ENST00000515597 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 SIGLEC10Q96LC7 697 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 SLC6A18Q96N87 628 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 CNTD2Q9H8S5 307 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
LINC01088-211ENST00000515597 A0A0G2JLL6 359 aaPredicted RBP6.93□□□□□ -1.3
LINC01088-211ENST00000515597 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 FADS2P1A8MWK0 482 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
LINC01088-211ENST00000515597 CTSKP43235 329 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 KCNC2Q96PR1 638 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 CDADC1Q9BWV3 514 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 ERVK13-1Q9NX77 482 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
LINC01088-211ENST00000515597 HRKO00198 91 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 CCNFP41002 786 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 ERVFRD-1P60508 538 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 HOMEZQ8IX15 550 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 REXO1Q8N1G1 1221 aaKnown RBP6.92□□□□□ -1.3
LINC01088-211ENST00000515597 BCL11AQ9H165 835 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 FBXL21Q9UKT6 434 aa6.92□□□□□ -1.3
LINC01088-211ENST00000515597 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 ZNF205O95201 554 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-211ENST00000515597 CEBPAP49715 358 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-211ENST00000515597 CDR1P51861 262 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 YBX1P67809 324 aaKnown RBP6.91□□□□□ -1.3
LINC01088-211ENST00000515597 GALNT18Q6P9A2 607 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-211ENST00000515597 SLC9A7Q96T83 725 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 EPB41L4AQ9HCS5 686 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-211ENST00000515597 PCDHB12Q9Y5F1 795 aa6.91□□□□□ -1.3
LINC01088-211ENST00000515597 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 N4BP3O15049 544 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 PRKCAP17252 672 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 ZNF165P49910 485 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 MFAP1P55081 439 aaKnown RBP6.9□□□□□ -1.3
LINC01088-211ENST00000515597 TMEM151BQ8IW70 566 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 NKD1Q969G9 470 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 RELTQ969Z4 430 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 DACT3Q96B18 629 aaPredicted RBP6.9□□□□□ -1.3
LINC01088-211ENST00000515597 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 KLHL14Q9P2G3 628 aa6.9□□□□□ -1.3
LINC01088-211ENST00000515597 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
LINC01088-211ENST00000515597 NUDT19A8MXV4 375 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 BMP8BP34820 402 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 AFF3P51826 1226 aaKnown RBP6.89□□□□□ -1.31
LINC01088-211ENST00000515597 AUHQ13825 339 aaKnown RBP6.89□□□□□ -1.31
LINC01088-211ENST00000515597 VMACQ2NL98 169 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 TMC6Q7Z403 805 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
LINC01088-211ENST00000515597 C9IYK1 514 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 IRS4O14654 1257 aaPredicted RBP6.88□□□□□ -1.31
LINC01088-211ENST00000515597 MPOP05164 745 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 ACRP10323 421 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 VAV1P15498 845 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
LINC01088-211ENST00000515597 TDRD10Q5VZ19 366 aaKnown RBP6.88□□□□□ -1.31
LINC01088-211ENST00000515597 OLFML2BQ68BL8 750 aa6.88□□□□□ -1.31
LINC01088-211ENST00000515597 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms