RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 GPATCH4Q5T3I0 446 aaKnown RBP30.39■■■□□ 2.46
DDR1-279ENST00000515529 NCAPG2Q86XI2 1143 aa30.39■■■□□ 2.46
DDR1-279ENST00000515529 SHCBP1Q8NEM2 672 aa30.39■■■□□ 2.46
DDR1-279ENST00000515529 NEK1Q96PY6 1258 aa30.39■■■□□ 2.46
DDR1-279ENST00000515529 GABRQQ9UN88 632 aa30.39■■■□□ 2.46
DDR1-279ENST00000515529 HSPA4P34932 840 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 ANTXR2P58335 489 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 ZNF543Q08ER8 600 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 TSGA10IPQ3SY00 556 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 SLC9C1Q4G0N8 1177 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 CPXCR1Q8N123 301 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 SOCS4Q8WXH5 440 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 NUDT12Q9BQG2 462 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 MTA3Q9BTC8 594 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 TEX13BQ9BXU2 312 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 MROH8Q9H579 483 aa30.38■■■□□ 2.45
DDR1-279ENST00000515529 SNHG28P0DPA3 235 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 ERCC3P19447 782 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 SLC4A3P48751 1232 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 RASEFQ8IZ41 740 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 TMEM87BQ96K49 555 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 SLC38A10Q9HBR0 1119 aa30.37■■■□□ 2.45
DDR1-279ENST00000515529 PARP1P09874 1014 aaKnown RBP30.36■■■□□ 2.45
DDR1-279ENST00000515529 ASPRV1Q53RT3 343 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 SYDE2Q5VT97 1194 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 SNRNP48Q6IEG0 339 aaKnown RBP30.36■■■□□ 2.45
DDR1-279ENST00000515529 TTBK2Q6IQ55 1244 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 NFXL1Q6ZNB6 911 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 NBPF11Q86T75 865 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 RIOX2Q8IUF8 465 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 REPS2Q8NFH8 660 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 ZNF214Q9UL59 606 aaPredicted RBP30.36■■■□□ 2.45
DDR1-279ENST00000515529 PRR12Q9ULL5 1215 aa30.36■■■□□ 2.45
DDR1-279ENST00000515529 HMGB1P09429 215 aaKnown RBP30.35■■■□□ 2.45
DDR1-279ENST00000515529 SLC16A2P36021 539 aa30.35■■■□□ 2.45
DDR1-279ENST00000515529 BTNL9Q6UXG8 535 aa30.35■■■□□ 2.45
DDR1-279ENST00000515529 CATIPQ7Z7H3 387 aa30.35■■■□□ 2.45
DDR1-279ENST00000515529 TMTC2Q8N394 836 aa30.35■■■□□ 2.45
DDR1-279ENST00000515529 RAVER2Q9HCJ3 691 aaKnown RBP30.35■■■□□ 2.45
DDR1-279ENST00000515529 SLC15A5A6NIM6 579 aa30.34■■■□□ 2.45
DDR1-279ENST00000515529 GOLGA8HP0CJ92 632 aa30.34■■■□□ 2.45
DDR1-279ENST00000515529 OAZ1P54368 228 aa30.34■■■□□ 2.45
DDR1-279ENST00000515529 IRF5Q13568 498 aa30.34■■■□□ 2.45
DDR1-279ENST00000515529 IGDCC4Q8TDY8 1250 aa30.34■■■□□ 2.45
DDR1-279ENST00000515529 BIN2Q9UBW5 565 aaPredicted RBP30.34■■■□□ 2.45
DDR1-279ENST00000515529 CCDC69A6NI79 296 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 ATP2A1O14983 1001 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 STRNO43815 780 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 ADCY3O60266 1144 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 PTPREP23469 700 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 GRK4P32298 578 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 RGS2P41220 211 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 SLAIN1Q8ND83 568 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 KCNB2Q92953 911 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 USP26Q9BXU7 913 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 GJD2Q9UKL4 321 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 GTF3C3Q9Y5Q9 886 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 SNX14Q9Y5W7 946 aa30.33■■■□□ 2.45
DDR1-279ENST00000515529 COL11A1P12107 1806 aaPredicted RBP30.33■■■□□ 2.45
DDR1-279ENST00000515529 CCDC85CA6NKD9 419 aa30.32■■■□□ 2.44
DDR1-279ENST00000515529 ADCK5Q3MIX3 580 aa30.32■■■□□ 2.44
DDR1-279ENST00000515529 CCDC174Q6PII3 467 aa30.32■■■□□ 2.44
DDR1-279ENST00000515529 DHX32Q7L7V1 743 aaKnown RBP30.32■■■□□ 2.44
DDR1-279ENST00000515529 JAKMIP1Q96N16 626 aaKnown RBP30.32■■■□□ 2.44
DDR1-279ENST00000515529 LY9Q9HBG7 655 aa30.32■■■□□ 2.44
DDR1-279ENST00000515529 WDR19Q8NEZ3 1342 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 SH2B2O14492 632 aaPredicted RBP30.31■■■□□ 2.44
DDR1-279ENST00000515529 FCER1AP12319 257 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 CYP2B6P20813 491 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 PSMA5P28066 241 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 MORN1Q5T089 497 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 SENP2Q9HC62 589 aa30.31■■■□□ 2.44
DDR1-279ENST00000515529 DHX16O60231 1041 aaKnown RBP30.3■■■□□ 2.44
DDR1-279ENST00000515529 SNAP25P60880 206 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 FGD1P98174 961 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 MAP2K5Q13163 448 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 PXYLP1Q8TE99 480 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 SH3TC2Q8TF17 1288 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 LRRC2Q9BYS8 371 aa30.3■■■□□ 2.44
DDR1-279ENST00000515529 GRB14Q14449 540 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 KCTD2Q14681 263 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 BLOC1S2Q6QNY1 142 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 DPP9Q86TI2 863 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 NUP133Q8WUM0 1156 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 MMP19Q99542 508 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 APBA2Q99767 749 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 UBA5Q9GZZ9 404 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 GPHNQ9NQX3 736 aaPredicted RBP30.29■■■□□ 2.44
DDR1-279ENST00000515529 SLC5A4Q9NY91 659 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 FBXO40Q9UH90 709 aa30.29■■■□□ 2.44
DDR1-279ENST00000515529 LIFRP42702 1097 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 UBXN2AP68543 259 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 TRMT44Q8IYL2 757 aaKnown RBP30.28■■■□□ 2.44
DDR1-279ENST00000515529 ZNF654Q8IZM8 581 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 ABRAQ8N0Z2 381 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 ARMC5Q96C12 935 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 RANBP17Q9H2T7 1088 aaKnown RBP30.28■■■□□ 2.44
DDR1-279ENST00000515529 PNMA2Q9UL42 364 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 CCPG1Q9ULG6 757 aa30.28■■■□□ 2.44
DDR1-279ENST00000515529 DOCK3Q8IZD9 2030 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms