RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
ITGA3-214ENST00000514834 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
ITGA3-214ENST00000514834 MTMR7Q9Y216 660 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 AKNAD1Q5T1N1 836 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 RAVER2Q9HCJ3 691 aaKnown RBP16.42■□□□□ 0.22
ITGA3-214ENST00000514834 SYNPO2Q9UMS6 1093 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 NEDD4P46934 1319 aa16.42■□□□□ 0.22
ITGA3-214ENST00000514834 LAMA4Q16363 1823 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 SLC25A27O95847 323 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 FCER1AP12319 257 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 SNAP25P60880 206 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 PRAMEF19Q5SWL8 479 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 MFSD14CQ5VZR4 134 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
ITGA3-214ENST00000514834 RCSD1Q6JBY9 416 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 OGDHLQ9ULD0 1010 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 PLXNA1Q9UIW2 1896 aa16.41■□□□□ 0.22
ITGA3-214ENST00000514834 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 H0YGN5 161 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 HIP1O00291 1037 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
ITGA3-214ENST00000514834 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 DPF3Q92784 378 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 MMP19Q99542 508 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 ZKSCAN3Q9BRR0 538 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
ITGA3-214ENST00000514834 ISY1Q9ULR0 285 aaKnown RBP16.4■□□□□ 0.22
ITGA3-214ENST00000514834 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.22
ITGA3-214ENST00000514834 ZNF213O14771 459 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 ZBED4O75132 1171 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 CYBAP13498 195 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.21
ITGA3-214ENST00000514834 CHMLP26374 656 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 SLC1A4P43007 532 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 TCP11L1Q9NUJ3 509 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 ZNF536O15090 1300 aa16.39■□□□□ 0.21
ITGA3-214ENST00000514834 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 CNGA1P29973 690 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 PTH1RQ03431 593 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 ZNF792Q3KQV3 632 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
ITGA3-214ENST00000514834 B4E1Z4 1266 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
ITGA3-214ENST00000514834 SLC16A2P36021 539 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 STAT2P52630 851 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 KCTD2Q14681 263 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
ITGA3-214ENST00000514834 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
ITGA3-214ENST00000514834 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 KDM4AO75164 1064 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
ITGA3-214ENST00000514834 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 PPP4R3BQ5MIZ7 849 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 FAM160B2Q86V87 743 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 ANKLE1Q8NAG6 615 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 CHURC1Q8WUH1 139 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 FGD4Q96M96 766 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
ITGA3-214ENST00000514834 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
ITGA3-214ENST00000514834 PFASO15067 1338 aa16.36■□□□□ 0.21
ITGA3-214ENST00000514834 PLA2G6O60733 806 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 DCAF4Q8WV16 495 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 ESR2Q92731 530 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 RNF41Q9H4P4 317 aaPredicted RBP16.35■□□□□ 0.21
ITGA3-214ENST00000514834 PPP4R2Q9NY27 417 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 SLC5A4Q9NY91 659 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 ZSWIM5Q9P217 1185 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 MCM3APO60318 1980 aa16.35■□□□□ 0.21
ITGA3-214ENST00000514834 PDHBP11177 359 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
ITGA3-214ENST00000514834 COL6A1P12109 1028 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 CAPN2P17655 700 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 COPB2P35606 906 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 IMMTQ16891 758 aaKnown RBP16.34■□□□□ 0.21
ITGA3-214ENST00000514834 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms