RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 NKX2-4Q9H2Z4 354 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 PCDHB12Q9Y5F1 795 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
RFC1-216ENST00000514572 ETV3P41162 512 aa7.09□□□□□ -1.27
RFC1-216ENST00000514572 SNW1Q13573 536 aaKnown RBP7.09□□□□□ -1.27
RFC1-216ENST00000514572 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.27
RFC1-216ENST00000514572 MTFR1LQ9H019 292 aa7.09□□□□□ -1.27
RFC1-216ENST00000514572 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
RFC1-216ENST00000514572 DIS3Q9Y2L1 958 aaKnown RBP7.09□□□□□ -1.27
RFC1-216ENST00000514572 TNPO3Q9Y5L0 923 aaKnown RBP7.09□□□□□ -1.27
RFC1-216ENST00000514572 WASHC2CQ9Y4E1 1318 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
RFC1-216ENST00000514572 KCNH1O95259 989 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 ASLP04424 464 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 HOXC12P31275 282 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 ZNF460Q14592 562 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 DHCR24Q15392 516 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 HSP90AB2PQ58FF8 381 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 CDPF1Q6NVV7 123 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 CNNM4Q6P4Q7 775 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PKN3Q6P5Z2 889 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.08□□□□□ -1.28
RFC1-216ENST00000514572 CDH24Q86UP0 819 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 RAVER1Q8IY67 606 aaKnown RBP7.08□□□□□ -1.28
RFC1-216ENST00000514572 FIBCD1Q8N539 461 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 KCTD13Q8WZ19 329 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PTPRN2Q92932 1015 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 BRF1Q92994 677 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 FAM46AQ96IP4 442 aaKnown RBP7.08□□□□□ -1.28
RFC1-216ENST00000514572 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 CEP89Q96ST8 783 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PRDM14Q9GZV8 571 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 SLC52A1Q9NWF4 448 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 NDOR1Q9UHB4 597 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 EID1Q9Y6B2 187 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 PHLDB1Q86UU1 1377 aa7.08□□□□□ -1.28
RFC1-216ENST00000514572 EOMESO95936 686 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 RAB6AP20340 208 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 RASSF7Q02833 373 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
RFC1-216ENST00000514572 SEPT7Q16181 437 aaKnown RBP7.07□□□□□ -1.28
RFC1-216ENST00000514572 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 MAMDC2Q7Z304 686 aaPredicted RBP7.07□□□□□ -1.28
RFC1-216ENST00000514572 NECAB2Q7Z6G3 386 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 FMNL3Q8IVF7 1028 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 KREMEN2Q8NCW0 462 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 NOL6Q9H6R4 1146 aaKnown RBP7.07□□□□□ -1.28
RFC1-216ENST00000514572 RRAGCQ9HB90 399 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 CYP26B1Q9NR63 512 aa7.07□□□□□ -1.28
RFC1-216ENST00000514572 CNTNAP4Q9C0A0 1308 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 TCRBV16S1A1N1A0A5B0 115 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 BLACEA4D250 179 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 RBAK-RBAKDNI3L0D1 243 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 ALX3O95076 343 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 PCBP1Q15365 356 aaKnown RBP eCLIP7.06□□□□□ -1.28
RFC1-216ENST00000514572 TESK1Q15569 626 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 STYK1Q6J9G0 422 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 AHI1Q8N157 1196 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 TMEM151AQ8N4L1 468 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
RFC1-216ENST00000514572 ASPSCR1Q9BZE9 553 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 AKTIPQ9H8T0 292 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 DAGLAQ9Y4D2 1042 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 ASXL2Q76L83 1435 aa7.06□□□□□ -1.28
RFC1-216ENST00000514572 SIGLEC6O43699 453 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 LRRN2O75325 713 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 ALDH1L1O75891 902 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 GDF11O95390 407 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 NFICP08651 508 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 IGFALSP35858 605 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 EPHB1P54762 984 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 TTF1Q15361 905 aaPredicted RBP7.05□□□□□ -1.28
RFC1-216ENST00000514572 NFE2Q16621 373 aaPredicted RBP7.05□□□□□ -1.28
RFC1-216ENST00000514572 LHFPL2Q6ZUX7 228 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
RFC1-216ENST00000514572 ANKLE2Q86XL3 938 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 NEDD1Q8NHV4 660 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 Q96M66 194 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 UBL7Q96S82 380 aaPredicted RBP7.05□□□□□ -1.28
RFC1-216ENST00000514572 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 ENAMQ9NRM1 1142 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 C1GALT1Q9NS00 363 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 GFOD1Q9NXC2 390 aa7.05□□□□□ -1.28
RFC1-216ENST00000514572 RNF225M0QZC1 329 aaPredicted RBP7.04□□□□□ -1.28
RFC1-216ENST00000514572 GPR39O43194 453 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 RASGRP1O95267 797 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 CPP00450 1065 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 BPIP17213 487 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 GUCY2FP51841 1108 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 FAM50AQ14320 339 aaKnown RBP7.04□□□□□ -1.28
RFC1-216ENST00000514572 PRSS53Q2L4Q9 553 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 UVSSAQ2YD98 709 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 SGO2Q562F6 1265 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 NOL9Q5SY16 702 aaKnown RBP7.04□□□□□ -1.28
RFC1-216ENST00000514572 WWC2Q6AWC2 1192 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms