RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 GPR142Q7Z601 462 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 REPS2Q8NFH8 660 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 IGDCC4Q8TDY8 1250 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 SENP2Q9HC62 589 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SNHG28P0DPA3 235 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 ERCC3P19447 782 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SNAP25P60880 206 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SLC38A10Q9HBR0 1119 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
USP46-209ENST00000514536 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 RLFQ13129 1914 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SOX10P56693 466 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 KCNB2Q92953 911 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 NUDT12Q9BQG2 462 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 USP26Q9BXU7 913 aa16.34■□□□□ 0.21
USP46-209ENST00000514536 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
USP46-209ENST00000514536 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
USP46-209ENST00000514536 SLC25A27O95847 323 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 FDX1P10109 184 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 PTPREP23469 700 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 KRT32Q14532 448 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 SLC9C1Q4G0N8 1177 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 RIOX2Q8IUF8 465 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 MROH8Q9H579 483 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
USP46-209ENST00000514536 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
USP46-209ENST00000514536 ADCY3O60266 1144 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 CYP2B6P20813 491 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 IRF5Q13568 498 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 MORN1Q5T089 497 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 GPATCH4Q5T3I0 446 aaKnown RBP16.32■□□□□ 0.2
USP46-209ENST00000514536 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
USP46-209ENST00000514536 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 TMEM87BQ96K49 555 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
USP46-209ENST00000514536 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 PARP1P09874 1014 aaKnown RBP16.31■□□□□ 0.2
USP46-209ENST00000514536 GRK4P32298 578 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 DHX32Q7L7V1 743 aaKnown RBP16.31■□□□□ 0.2
USP46-209ENST00000514536 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
USP46-209ENST00000514536 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
USP46-209ENST00000514536 STRNO43815 780 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 ELNP15502 786 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 OAZ1P54368 228 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
USP46-209ENST00000514536 ASPRV1Q53RT3 343 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 NFXL1Q6ZNB6 911 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 CATIPQ7Z7H3 387 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 USP6NLQ92738 828 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 AGBL1Q96MI9 1066 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
USP46-209ENST00000514536 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
USP46-209ENST00000514536 ZNF536O15090 1300 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 CPA1P15085 419 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 COPB2P35606 906 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 RGS2P41220 211 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 GRB14Q14449 540 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 PXYLP1Q8TE99 480 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
USP46-209ENST00000514536 TNRC18O15417 2968 aaPredicted RBP16.29■□□□□ 0.2
USP46-209ENST00000514536 MGAMO43451 1857 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
USP46-209ENST00000514536 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
USP46-209ENST00000514536 FCER1AP12319 257 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 ADORA2AP29274 412 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 LIFRP42702 1097 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 TROAPQ12815 778 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 DPP9Q86TI2 863 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 MMP19Q99542 508 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms