RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 KIF4AO95239 1232 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 PEX19P40855 299 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 C8orf74Q6P047 294 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 LMNTD2Q8IXW0 634 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 MICAL1Q8TDZ2 1067 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 FHOD1Q9Y613 1164 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 XDHP47989 1333 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 BTBD18B2RXH4 712 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.56□□□□□ -0.08
TCOF1-213ENST00000514442 SAR1BQ9Y6B6 198 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 FAM169AQ9Y6X4 670 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 IKBKBO14920 756 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 PFKFB1P16118 471 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 IFI16Q16666 785 aaKnown RBP14.56□□□□□ -0.08
TCOF1-213ENST00000514442 LCORLQ8N3X6 602 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 FBF1Q8TES7 1133 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 GPR101Q96P66 508 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-213ENST00000514442 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-213ENST00000514442 CHUKO15111 745 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 ZKSCAN8Q15776 578 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-213ENST00000514442 NYAP1Q6ZVC0 841 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 CSGALNACT2Q8N6G5 542 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 TTLL11Q8NHH1 800 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 ATG3Q9NT62 314 aa14.56□□□□□ -0.08
TCOF1-213ENST00000514442 DIP2CQ9Y2E4 1556 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 SNAP23O00161 211 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 ADD2P35612 726 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 TBC1D8BQ0IIM8 1120 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 LARGE1O95461 756 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CCZ1BP86790 482 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CCZ1P86791 482 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-213ENST00000514442 ATP11AP98196 1134 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 HAUS3Q68CZ6 603 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CABP7Q86V35 215 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 JAKMIP2Q96AA8 810 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 H7C1W4 665 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 H2AFXP16104 143 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-213ENST00000514442 PAK1Q13153 545 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 DPCR1Q3MIW9 517 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 NLGN1Q8N2Q7 840 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CLIC6Q96NY7 704 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 GOLGA8FQ08AF8 430 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 GOLGA8DPQ0D2H9 430 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 PNMA8AQ86V59 439 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-213ENST00000514442 SELENOSQ9BQE4 189 aa14.55□□□□□ -0.08
TCOF1-213ENST00000514442 CCDC169A6NNP5 214 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 INF2Q27J81 1249 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 B4DLN1 442 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 KLRF2D3W0D1 207 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 TTC19Q6DKK2 380 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-213ENST00000514442 KRT27Q7Z3Y8 459 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 IMPG2Q9BZV3 1241 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 EPC1Q9H2F5 836 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 PIH1D3Q9NQM4 214 aaKnown RBP14.54□□□□□ -0.08
TCOF1-213ENST00000514442 TAB2Q9NYJ8 693 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 SETBP1Q9Y6X0 1596 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 A0A087WWV3 80 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 CLIC4Q9Y696 253 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 RPAP1Q9BWH6 1393 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-213ENST00000514442 ATP1A2P50993 1020 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 NDUFA8P51970 172 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 CCDC6Q16204 474 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 LONRF3Q496Y0 759 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 NELFCDQ8IXH7 590 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 FLAD1Q8NFF5 587 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 DBNDD1Q9H9R9 158 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 TNS3Q68CZ2 1445 aa14.54□□□□□ -0.08
TCOF1-213ENST00000514442 LMTK2Q8IWU2 1503 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 BLIDQ8IZY5 108 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 CCDC155Q8N6L0 562 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 IFT74Q96LB3 600 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 FANCLQ9NW38 375 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 A0A1W2PQ27 194 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 A0A1W2PQ64 194 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 A0A1W2PQD8 194 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 RASGRF1Q13972 1273 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 HERC4Q5GLZ8 1057 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-213ENST00000514442 SETSIPP0DME0 302 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 RPL13P26373 211 aaKnown RBP14.53□□□□□ -0.08
TCOF1-213ENST00000514442 CORO7P57737 925 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 PNPLA6Q8IY17 1366 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 VSTM4Q8IW00 320 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 SLC35F6Q8N357 371 aa14.53□□□□□ -0.08
TCOF1-213ENST00000514442 RPSAP08865 295 aaKnown RBP14.52□□□□□ -0.08
TCOF1-213ENST00000514442 PCK1P35558 622 aa14.52□□□□□ -0.08
TCOF1-213ENST00000514442 TNNC1P63316 161 aa14.52□□□□□ -0.08
TCOF1-213ENST00000514442 SATB1Q01826 763 aa14.52□□□□□ -0.08
TCOF1-213ENST00000514442 KIAA0753Q2KHM9 967 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms