RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ADAMTS10	Q9H324	1103 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CHST7	Q9NS84	486 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TNFRSF10D	Q9UBN6	386 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TCFL5	Q9UL49	500 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	STRIP2	Q9ULQ0	834 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PEX10	O60683	326 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LRRN2	O75325	713 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GSN	P06396	782 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GUCY2C	P25092	1073 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PMS1	P54277	932 aa	Known RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TMEM62	Q0P6H9	643 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	MESP2	Q0VG99	397 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FZD5	Q13467	585 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	C19orf47	Q8N9M1	422 aa	Known RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FCRL2	Q96LA5	508 aa	Predicted RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SLC6A18	Q96N87	628 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CRTAC1	Q9NQ79	661 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZMYM5	Q9UJ78	669 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TMA7	Q9Y2S6	64 aa	Known RBP	5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZNF281	Q9Y2X9	895 aa		5.1	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ABLIM1	O14639	778 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SEMA7A	O75326	666 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TMEM253	P0C7T8	217 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NCL	P19338	710 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GLDC	P23378	1020 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	BMP8B	P34820	402 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ARL4A	P40617	200 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	AUH	Q13825	339 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SLC14A2	Q15849	920 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CCDC144B	Q3MJ40	725 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ANKRD39	Q53RE8	183 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZNF648	Q5T619	568 aa	Predicted RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FYB2	Q5VWT5	728 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CWF19L1	Q69YN2	538 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GIMAP6	Q6P9H5	292 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ANKLE2	Q86XL3	938 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LINC01599	Q8WXQ3	324 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TCTN2	Q96GX1	697 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LIN37	Q96GY3	246 aa	Predicted RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NSUN3	Q9H649	340 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PHAX	Q9H814	394 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FBXL21	Q9UKT6	434 aa		5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	YBX2	Q9Y2T7	364 aa	Known RBP	5.09	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NRDC	O43847	1150 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PRAMEF1	O95521	474 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SYP	P08247	313 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	RPL10	P27635	214 aa	Known RBP	5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	POLR2B	P30876	1174 aa	Known RBP	5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SOX9	P48436	509 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	JAG1	P78504	1218 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	LAPTM5	Q13571	262 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TCEAL1	Q15170	157 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	FBXW10	Q5XX13	1052 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GALNT18	Q6P9A2	607 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CYP2R1	Q6VVX0	501 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	WAPL	Q7Z5K2	1190 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	KRTAP1-3	Q8IUG1	177 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CCDC144CP	Q8IYA2	1237 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CKAP2L	Q8IYA6	745 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	C7orf61	Q8IZ16	206 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	MAP6	Q96JE9	813 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	DSCC1	Q9BVC3	393 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PRDM14	Q9GZV8	571 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GPR160	Q9UJ42	338 aa		5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SF3B6	Q9Y3B4	125 aa	Known RBP	5.08	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A087WZG4	1122 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQ45	241 aa	Predicted RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQY0	241 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TLDC2	A0PJX2	215 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SHISA3	A0PJX4	238 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	OR14I1	A6ND48	311 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TCAF2	A6NFQ2	919 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	WTIP	A6NIX2	430 aa	Predicted RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	MED14OS	P0DP75	135 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NAT2	P11245	290 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NOP2	P46087	812 aa	Known RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	EIF6	P56537	245 aa	Known RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NFE2L2	Q16236	605 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	USHBP1	Q8N6Y0	703 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	INTS4	Q96HW7	963 aa	Known RBP	5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SLC9A7	Q96T83	725 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	RNF32	Q9H0A6	362 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GBP3	Q9H0R5	595 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	OSBPL2	Q9H1P3	480 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	FHOD1	Q9Y613	1164 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TAF6L	Q9Y6J9	622 aa		5.07	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF205	O95201	554 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SSB	P05455	408 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ITGA4	P13612	1032 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NOL9	Q5SY16	702 aa	Known RBP	5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PRR23B	Q6ZRT6	265 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TMC3	Q7Z5M5	1100 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SIAH1	Q8IUQ4	282 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TMEM192	Q8IY95	271 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	MKL1	Q969V6	931 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms