RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TXNRD2Q9NNW7 524 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 SAGE1Q9NXZ1 904 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 SYNPO2Q9UMS6 1093 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 SLC45A1Q9Y2W3 748 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 CYP46A1Q9Y6A2 500 aa11.47□□□□□ -0.57
TOPBP1-209ENST00000513818 WDR19Q8NEZ3 1342 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 KLF18A0A0U1RQI7 1052 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 TLR2O60603 784 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 CNMDO75829 334 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 HMGB1P09429 215 aaKnown RBP11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 SNHG28P0DPA3 235 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 PSMA5P28066 241 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 LBX1P52954 281 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 ANAPC15P60006 121 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 KIF2CQ99661 725 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 UBA5Q9GZZ9 404 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 UPF2Q9HAU5 1272 aaKnown RBP11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 BTBD7Q9P203 1132 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.57
TOPBP1-209ENST00000513818 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 GPR25O00155 361 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 BCRP11274 1271 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 TROAPQ12815 778 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 GRM4Q14833 912 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 SLC35G1Q2M3R5 365 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 C17orf99Q6UX52 265 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 CMTR1Q8N1G2 835 aaKnown RBP11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 CD99L2Q8TCZ2 262 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 TM6SF1Q9BZW5 370 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 PDRG1Q9NUG6 133 aa11.45□□□□□ -0.58
TOPBP1-209ENST00000513818 MGAMO43451 1857 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 HTTP42858 3142 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 DHX16O60231 1041 aaKnown RBP11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 DTNBO60941 627 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 DDAH1O94760 285 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PARP1P09874 1014 aaKnown RBP11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 CTGFP29279 349 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 LIFRP42702 1097 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 STAT2P52630 851 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 AK2P54819 239 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PLS1Q14651 629 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 COG2Q14746 738 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 APOA5Q6Q788 366 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PORCNQ9H237 461 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 FEM1BQ9UK73 627 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
TOPBP1-209ENST00000513818 GOLGA8AA7E2F4 631 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 VWA5AO00534 786 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 ZBTB43O43298 467 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 LARGE1O95461 756 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 NEK4P51957 841 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 ERVK-9P63128 1117 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 ERVK-24P63145 666 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 STK3Q13188 491 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 Q3C1V9 767 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 LBX2Q6XYB7 198 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 NBPF11Q86T75 865 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 FAM160B2Q86V87 743 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 SGMS1Q86VZ5 419 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 IL17RAQ96F46 866 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 MTA3Q9BTC8 594 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 AGXT2Q9BYV1 514 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 PLXNB2O15031 1838 aa11.43□□□□□ -0.58
TOPBP1-209ENST00000513818 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
TOPBP1-209ENST00000513818 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
TOPBP1-209ENST00000513818 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
TOPBP1-209ENST00000513818 KLRF2D3W0D1 207 aa11.42□□□□□ -0.58
TOPBP1-209ENST00000513818 FKTNO75072 461 aa11.42□□□□□ -0.58
TOPBP1-209ENST00000513818 SP3Q02447 781 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms