RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ATG4CQ96DT6 458 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 NECAB3Q96P71 396 aaPredicted RBP10.94□□□□□ -0.66
CAST-239ENST00000513666 MSRAQ9UJ68 235 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 DIS3Q9Y2L1 958 aaKnown RBP10.94□□□□□ -0.66
CAST-239ENST00000513666 FPGT-TNNI3KV9GXZ4 949 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 PNMA6EA0A0J9YXQ4 647 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 FLOT1O75955 427 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 PGK2P07205 417 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 CSF2RAP15509 400 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 CDK7P50613 346 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 GABPAQ06546 454 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 TMEM132BQ14DG7 1078 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 CCSAPQ6IQ19 270 aaPredicted RBP10.94□□□□□ -0.66
CAST-239ENST00000513666 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 TMEM199Q8N511 208 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 KLHDC9Q8NEP7 349 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 MMP19Q99542 508 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 COL11A1P12107 1806 aaPredicted RBP10.93□□□□□ -0.66
CAST-239ENST00000513666 ELP1O95163 1332 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 IDH1O75874 414 aaKnown RBP10.93□□□□□ -0.66
CAST-239ENST00000513666 CT47B1P0C2W7 299 aaPredicted RBP10.93□□□□□ -0.66
CAST-239ENST00000513666 KCTD2Q14681 263 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 KCNA10Q16322 511 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 AAK1Q2M2I8 961 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 NKX2-4Q9H2Z4 354 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 SLC28A3Q9HAS3 691 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 CNPY2Q9Y2B0 182 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
CAST-239ENST00000513666 REV3LO60673 3130 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 PIEZO1Q92508 2521 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 MPHOSPH10O00566 681 aaKnown RBP10.92□□□□□ -0.66
CAST-239ENST00000513666 GNAI2P04899 355 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 ACRP10323 421 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 CST5P28325 142 aaPredicted RBP10.92□□□□□ -0.66
CAST-239ENST00000513666 TMED8Q6PL24 325 aaPredicted RBP10.92□□□□□ -0.66
CAST-239ENST00000513666 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 RIOX2Q8IUF8 465 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 MAGEB6Q8N7X4 407 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 GLT1D1Q96MS3 346 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 LRFN3Q9BTN0 628 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
CAST-239ENST00000513666 FAM184BQ9ULE4 1060 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 ADAMTS5Q9UNA0 930 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 BOLA1Q9Y3E2 137 aa10.92□□□□□ -0.66
CAST-239ENST00000513666 TRANK1O15050 2925 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 WDR46O15213 610 aaKnown RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 POLR3DP05423 398 aaPredicted RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 TFF2Q03403 129 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 MSL3Q8N5Y2 521 aaKnown RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 ARHGAP45Q92619 1136 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 IL23AQ9NPF7 189 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
CAST-239ENST00000513666 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
CAST-239ENST00000513666 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
CAST-239ENST00000513666 MYADML2A6NDP7 307 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 ARVCFO00192 962 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 APBB1O00213 710 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 SNPHO15079 494 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 ST18O60284 1047 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 DUSP11O75319 330 aaKnown RBP10.9□□□□□ -0.66
CAST-239ENST00000513666 COPB2P35606 906 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 FAM126BQ8IXS8 530 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 TRMT2AQ8IZ69 625 aaKnown RBP10.9□□□□□ -0.66
CAST-239ENST00000513666 PCSK9Q8NBP7 692 aaKnown RBP10.9□□□□□ -0.66
CAST-239ENST00000513666 EPHX3Q9H6B9 360 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 SH2D4AQ9H788 454 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 ARHGEF10LQ9HCE6 1279 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 DBNLQ9UJU6 430 aaKnown RBP10.9□□□□□ -0.66
CAST-239ENST00000513666 MYH8P13535 1937 aa10.9□□□□□ -0.66
CAST-239ENST00000513666 ERC2O15083 957 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 SNAI1O95863 264 aaPredicted RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 FGBP02675 491 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 ASGR1P07306 291 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 CYP2C18P33260 490 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 STAT3P40763 770 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 KCNQ1P51787 676 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 MICALL1Q8N3F8 863 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 VTI1AQ96AJ9 217 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 UPF3AQ9H1J1 476 aaKnown RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 ZHX1Q9UKY1 873 aaPredicted RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 VWA5AO00534 786 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 CD4P01730 458 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 C6orf222P0C671 652 aaPredicted RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 ICA1Q05084 483 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms