RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
TCOF1-212ENST00000513538 CCSAPQ6IQ19 270 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-212ENST00000513538 RNF180Q86T96 592 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 RPAP2Q8IXW5 612 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-212ENST00000513538 KLHDC9Q8NEP7 349 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 FGD4Q96M96 766 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 GOPCQ9HD26 462 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 GBF1Q92538 1859 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 RAD21O60216 631 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 NDUFB10O96000 172 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 RAG1P15918 1043 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 RASA1P20936 1047 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 ACLYP53396 1101 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 FPGSQ05932 587 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 GRIN2CQ14957 1233 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 ANKRD33Q7Z3H0 272 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
TCOF1-212ENST00000513538 TBX21Q9UL17 535 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 TTC28Q96AY4 2481 aa11.59□□□□□ -0.55
TCOF1-212ENST00000513538 LCTP09848 1927 aa11.58□□□□□ -0.55
TCOF1-212ENST00000513538 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 HMMRO75330 724 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 DNAJB2P25686 324 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
TCOF1-212ENST00000513538 MAMDC4Q6UXC1 1216 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 STK11IPQ8N1F8 1099 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 TOX2Q96NM4 488 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
TCOF1-212ENST00000513538 TEX13BQ9BXU2 312 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 STARD7Q9NQZ5 370 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 SYNGAP1Q96PV0 1343 aa11.58□□□□□ -0.56
TCOF1-212ENST00000513538 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 TMEM265A0A087WTH1 108 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 IGKV6D-41A0A0C4DH26 115 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 F5H6K3 240 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 CTAGE5O15320 804 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 SMARCA5O60264 1052 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 COPB2P35606 906 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 PBX2P40425 430 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 KLRC3Q07444 240 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 KCNA10Q16322 511 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 AMOTL1Q8IY63 956 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 CPXCR1Q8N123 301 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 KATNBL1Q9H079 304 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 EPB41L4AQ9HCS5 686 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 ZHX1Q9UKY1 873 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-212ENST00000513538 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
TCOF1-212ENST00000513538 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 TIMP1P01033 207 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 CDK7P50613 346 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 SBK1Q52WX2 424 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 MSL3Q8N5Y2 521 aaKnown RBP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 UPF3AQ9H1J1 476 aaKnown RBP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 RAVER2Q9HCJ3 691 aaKnown RBP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-212ENST00000513538 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 FAM184BQ9ULE4 1060 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 DDX19BQ9UMR2 479 aa11.56□□□□□ -0.56
TCOF1-212ENST00000513538 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-212ENST00000513538 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-212ENST00000513538 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
TCOF1-212ENST00000513538 PRDM1O75626 825 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 ASGR1P07306 291 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 PTGS1P23219 599 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 ACVR2BQ13705 512 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 TMEM240Q5SV17 173 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 RASIP1Q5U651 963 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 TSHZ3Q63HK5 1081 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 MFSD5Q6N075 450 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 ARMCX2Q7L311 632 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 ZNF467Q7Z7K2 595 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-212ENST00000513538 FAM126BQ8IXS8 530 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 NUP133Q8WUM0 1156 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 DDX11Q96FC9 970 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 DDRGK1Q96HY6 314 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 ZNF576Q9H609 170 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
TCOF1-212ENST00000513538 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
TCOF1-212ENST00000513538 MINDY4BA8MYZ0 360 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 M0R2C6 588 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 C6orf222P0C671 652 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms