RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KIR3DL1P43629 444 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 LILRA2Q8N149 483 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 ZNF507Q8TCN5 953 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 MCOLN1Q9GZU1 580 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 SP110Q9HB58 689 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 ABCC5O15440 1437 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 ADGRL3Q9HAR2 1447 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 GCC2Q8IWJ2 1684 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 C1orf167Q5SNV9 1468 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 MARF1Q9Y4F3 1742 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 DNAJC25-GNG10A0A024R161 153 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 ICMTO60725 284 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 VPS72Q15906 364 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 SKOR2Q2VWA4 1001 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 PHLDB3Q6NSJ2 640 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 KRT27Q7Z3Y8 459 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 GGNQ86UU5 652 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 MFSD2AQ8NA29 543 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 ACSBG1Q96GR2 724 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 ORAI2Q96SN7 254 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 SLC6A17Q9H1V8 727 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 NPHP3Q7Z494 1330 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 CNTNAP4Q9C0A0 1308 aa5.66□□□□□ -1.5
PDLIM5-218ENST00000513341 TEX51A0A1B0GUA7 166 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 NDUFB5O43674 189 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 TRIM13O60858 407 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 IGHA2P01877 340 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 ESR1P03372 595 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 ADRB1P08588 477 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 FCGRTP55899 365 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 FGD1P98174 961 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 RALGPS1Q5JS13 557 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 ERICH6BQ5W0A0 696 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 PRRT2Q7Z6L0 340 aaPredicted RBP5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 PIWIL2Q8TC59 973 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 UBE2FQ969M7 185 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 XYLT2Q9H1B5 865 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 PICK1Q9NRD5 415 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 TPX2Q9ULW0 747 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 TIMELESSQ9UNS1 1208 aa5.65□□□□□ -1.5
PDLIM5-218ENST00000513341 PTPN23Q9H3S7 1636 aa5.65□□□□□ -1.51
PDLIM5-218ENST00000513341 LRPPRCP42704 1394 aaKnown RBP5.65□□□□□ -1.51
PDLIM5-218ENST00000513341 XRN1Q8IZH2 1706 aaKnown RBP5.65□□□□□ -1.51
PDLIM5-218ENST00000513341 BRWD3Q6RI45 1802 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 MYOM2P54296 1465 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 RALGAPBQ86X10 1494 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 SLIT2O94813 1529 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 MYOCOSA0A1B0GUC4 107 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 RFXAPO00287 272 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 ERVFC1P60507 584 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 SLBPQ14493 270 aaKnown RBP eCLIP5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 R3HDM1Q15032 1099 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 NR0B2Q15466 257 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 PDZD8Q8NEN9 1154 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 RNF32Q9H0A6 362 aa5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 ZNF552Q9H707 407 aaPredicted RBP5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 CWC22Q9HCG8 908 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 CNOT6Q9ULM6 557 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-218ENST00000513341 GLI3P10071 1580 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 DCDC2CA8MYV0 355 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 ABL1P00519 1130 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 CELA3BP08861 270 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 BMP6P22004 513 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 CYP7A1P22680 504 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 ZNF211Q13398 564 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 C12orf40Q86WS4 652 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 ALKBH8Q96BT7 664 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 NECAB3Q96P71 396 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 GCM1Q9NP62 436 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 SAMM50Q9Y512 469 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 KCTD3Q9Y597 815 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 CSADQ9Y600 493 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 DAPK1P53355 1430 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 CROCC2H7BZ55 1655 aa5.63□□□□□ -1.51
PDLIM5-218ENST00000513341 ARHGAP4P98171 946 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 EPS8L3Q8TE67 593 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 ADAMTS10Q9H324 1103 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 TMPRSS5Q9H3S3 457 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 ZSWIM5Q9P217 1185 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 METP08581 1390 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 PARD3Q8TEW0 1356 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 DISP2A7MBM2 1401 aa5.62□□□□□ -1.51
PDLIM5-218ENST00000513341 SASH1O94885 1247 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 HK2P52789 917 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 C1QTNF8P60827 252 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 TNK2Q07912 1038 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 SNX17Q15036 470 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 LRRC14Q15048 493 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 NBPF8Q3BBV2 869 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 MPRIPQ6WCQ1 1025 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 OXR1Q8N573 874 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 ANKRD24Q8TF21 1146 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 CAMKK2Q96RR4 588 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 MIPEPQ99797 713 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 CBX8Q9HC52 389 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms