RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 RAD21O60216 631 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 TTLL1O95922 423 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 AKR1A1P14550 325 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 ADCYAP1R1P41586 468 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 OAZ1P54368 228 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 FEM1BQ9UK73 627 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 ATP11BQ9Y2G3 1177 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 M0R2C6 588 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 TSHZ3Q63HK5 1081 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 SLC17A8Q8NDX2 589 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 NEDD1Q8NHV4 660 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 NUP88Q99567 741 aaPredicted RBP30.07■■■□□ 2.4
CLDND1-226ENST00000513287 TSEN34Q9BSV6 310 aaKnown RBP30.07■■■□□ 2.4
CLDND1-226ENST00000513287 SLC38A10Q9HBR0 1119 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 CNPY2Q9Y2B0 182 aa30.07■■■□□ 2.4
CLDND1-226ENST00000513287 ZBED4O75132 1171 aa30.06■■■□□ 2.4
CLDND1-226ENST00000513287 APPP05067 770 aa30.06■■■□□ 2.4
CLDND1-226ENST00000513287 PDE4BQ07343 736 aa30.06■■■□□ 2.4
CLDND1-226ENST00000513287 SNRNP48Q6IEG0 339 aaKnown RBP30.06■■■□□ 2.4
CLDND1-226ENST00000513287 CEP95Q96GE4 821 aa30.06■■■□□ 2.4
CLDND1-226ENST00000513287 PCDHB15Q9Y5E8 787 aa30.06■■■□□ 2.4
CLDND1-226ENST00000513287 SLC3A2P08195 630 aaKnown RBP30.05■■■□□ 2.4
CLDND1-226ENST00000513287 PPP4R3BQ5MIZ7 849 aa30.05■■■□□ 2.4
CLDND1-226ENST00000513287 ZMYM1Q5SVZ6 1142 aa30.05■■■□□ 2.4
CLDND1-226ENST00000513287 FBXO40Q9UH90 709 aa30.05■■■□□ 2.4
CLDND1-226ENST00000513287 RIPK3Q9Y572 518 aa30.05■■■□□ 2.4
CLDND1-226ENST00000513287 TRIM60Q495X7 471 aa30.04■■■□□ 2.4
CLDND1-226ENST00000513287 CHST13Q8NET6 341 aa30.04■■■□□ 2.4
CLDND1-226ENST00000513287 DDX11Q96FC9 970 aa30.04■■■□□ 2.4
CLDND1-226ENST00000513287 Q7L0L9 218 aa30.03■■■□□ 2.4
CLDND1-226ENST00000513287 PDLIM7Q9NR12 457 aa30.03■■■□□ 2.4
CLDND1-226ENST00000513287 TACC3Q9Y6A5 838 aa30.03■■■□□ 2.4
CLDND1-226ENST00000513287 ADAMTS4O75173 837 aa30.02■■■□□ 2.4
CLDND1-226ENST00000513287 TAL1P17542 331 aaPredicted RBP30.02■■■□□ 2.4
CLDND1-226ENST00000513287 TICAM2Q86XR7 235 aa30.02■■■□□ 2.4
CLDND1-226ENST00000513287 STK11IPQ8N1F8 1099 aa30.02■■■□□ 2.4
CLDND1-226ENST00000513287 FAM184BQ9ULE4 1060 aa30.02■■■□□ 2.4
CLDND1-226ENST00000513287 PLA2G6O60733 806 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 PRDM1O75626 825 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 SNAI1O95863 264 aaPredicted RBP30.01■■■□□ 2.39
CLDND1-226ENST00000513287 TSPY3P0CV98 308 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 TSPY8P0CW00 308 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 FERMT2Q96AC1 680 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 NAPBQ9H115 298 aa30.01■■■□□ 2.39
CLDND1-226ENST00000513287 CTDP1Q9Y5B0 961 aaPredicted RBP30.01■■■□□ 2.39
CLDND1-226ENST00000513287 SALL3Q9BXA9 1300 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 PGK1P00558 417 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 MYCNP04198 464 aaPredicted RBP30■■■□□ 2.39
CLDND1-226ENST00000513287 BMP3P12645 472 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 MX1P20591 662 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 PPARAQ07869 468 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 KLHDC9Q8NEP7 349 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 KIFC2Q96AC6 838 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 GMCL1Q96IK5 515 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 TOX2Q96NM4 488 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 SEC62Q99442 399 aaKnown RBP30■■■□□ 2.39
CLDND1-226ENST00000513287 FSD1Q9BTV5 496 aa30■■■□□ 2.39
CLDND1-226ENST00000513287 MOXD2PA6NHM9 499 aa29.99■■■□□ 2.39
CLDND1-226ENST00000513287 DUSP11O75319 330 aaKnown RBP29.99■■■□□ 2.39
CLDND1-226ENST00000513287 TLE2Q04725 743 aa29.99■■■□□ 2.39
CLDND1-226ENST00000513287 CPXCR1Q8N123 301 aa29.99■■■□□ 2.39
CLDND1-226ENST00000513287 ABHD16BQ9H3Z7 469 aa29.99■■■□□ 2.39
CLDND1-226ENST00000513287 LAMA2P24043 3122 aaKnown RBP29.98■■■□□ 2.39
CLDND1-226ENST00000513287 A0A1W2PQ45 241 aaPredicted RBP29.98■■■□□ 2.39
CLDND1-226ENST00000513287 A0A1W2PQY0 241 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 TRIM43BA6NCK2 446 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 CST5P28325 142 aaPredicted RBP29.98■■■□□ 2.39
CLDND1-226ENST00000513287 TFAP4Q01664 338 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 SLFN13Q68D06 897 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 CCSAPQ6IQ19 270 aaPredicted RBP29.98■■■□□ 2.39
CLDND1-226ENST00000513287 ANKRD33Q7Z3H0 272 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 FAM160B2Q86V87 743 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 CHURC1Q8WUH1 139 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 NUP133Q8WUM0 1156 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 BADQ92934 168 aa29.98■■■□□ 2.39
CLDND1-226ENST00000513287 TRIM43Q96BQ3 446 aaPredicted RBP29.98■■■□□ 2.39
CLDND1-226ENST00000513287 KIAA0355O15063 1070 aa29.97■■■□□ 2.39
CLDND1-226ENST00000513287 STAT2P52630 851 aa29.97■■■□□ 2.39
CLDND1-226ENST00000513287 RAVER2Q9HCJ3 691 aaKnown RBP29.97■■■□□ 2.39
CLDND1-226ENST00000513287 PRDM5Q9NQX1 630 aaPredicted RBP29.97■■■□□ 2.39
CLDND1-226ENST00000513287 CLTBP09497 229 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 SHHQ15465 462 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 SH3RF1Q7Z6J0 888 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 ANKRD35Q8N283 1001 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 OTUD7AQ8TE49 926 aaPredicted RBP29.96■■■□□ 2.39
CLDND1-226ENST00000513287 ANAPC4Q9UJX5 808 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.96■■■□□ 2.39
CLDND1-226ENST00000513287 SYNRGQ9UMZ2 1314 aa29.96■■■□□ 2.39
CLDND1-226ENST00000513287 NOVP48745 357 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 ACLYP53396 1101 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 NKX3-2P78367 333 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 ACVR2BQ13705 512 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 TKFCQ3LXA3 575 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 LRRC47Q8N1G4 583 aaKnown RBP29.95■■■□□ 2.39
CLDND1-226ENST00000513287 STAG1Q8WVM7 1258 aa29.95■■■□□ 2.39
CLDND1-226ENST00000513287 FGD4Q96M96 766 aa29.94■■■□□ 2.38
CLDND1-226ENST00000513287 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.94■■■□□ 2.38
CLDND1-226ENST00000513287 ELP1O95163 1332 aa29.94■■■□□ 2.38
CLDND1-226ENST00000513287 TMEM232C9JQI7 657 aa29.93■■■□□ 2.38
CLDND1-226ENST00000513287 FOXP2O15409 715 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms