RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 ZSWIM5Q9P217 1185 aa20.91■□□□□ 0.94
DDR1-272ENST00000513243 ZBED4O75132 1171 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 ADORA2AP29274 412 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 GJA8P48165 433 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 MAP3K21Q5TCX8 1036 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 ABRAQ8N0Z2 381 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 SHISA4Q96DD7 197 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 TEX13BQ9BXU2 312 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 PAK6Q9NQU5 681 aaPredicted RBP20.9■□□□□ 0.94
DDR1-272ENST00000513243 FLRT1Q9NZU1 646 aa20.9■□□□□ 0.94
DDR1-272ENST00000513243 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
DDR1-272ENST00000513243 ATP2A1O14983 1001 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 PLA2G6O60733 806 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 COBLO75128 1261 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 CYP21A2P08686 494 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 STAT2P52630 851 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 DPP9Q86TI2 863 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 FAM160B2Q86V87 743 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 CPXCR1Q8N123 301 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 U2AF1L4Q8WU68 220 aaKnown RBP20.89■□□□□ 0.93
DDR1-272ENST00000513243 DCAF4Q8WV16 495 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 MAP4K1Q92918 833 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 KRT23Q9C075 422 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 CNNM2Q9H8M5 875 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 RAVER2Q9HCJ3 691 aaKnown RBP20.89■□□□□ 0.93
DDR1-272ENST00000513243 RIPK3Q9Y572 518 aa20.89■□□□□ 0.93
DDR1-272ENST00000513243 RPTORQ8N122 1335 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 BRCA2P51587 3418 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 CENPBP07199 599 aaPredicted RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 FCER1AP12319 257 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 PRKAR2AP13861 404 aaKnown RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 IKQ13123 557 aaPredicted RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 SNRNP48Q6IEG0 339 aaKnown RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 IQCA1Q86XH1 822 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 DGKHQ86XP1 1220 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 DEFB118Q96PH6 123 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 ESYT1Q9BSJ8 1104 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.88■□□□□ 0.93
DDR1-272ENST00000513243 HMX1Q9NP08 348 aaPredicted RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 CTDP1Q9Y5B0 961 aaPredicted RBP20.88■□□□□ 0.93
DDR1-272ENST00000513243 TAF6LQ9Y6J9 622 aa20.88■□□□□ 0.93
DDR1-272ENST00000513243 SGPL1O95470 568 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 FDX1P10109 184 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 COPB2P35606 906 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 CACNB2Q08289 660 aaPredicted RBP20.87■□□□□ 0.93
DDR1-272ENST00000513243 CCDC96Q2M329 555 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 TTBK2Q6IQ55 1244 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 ANKS1AQ92625 1134 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 ZSCAN10Q96SZ4 725 aaPredicted RBP20.87■□□□□ 0.93
DDR1-272ENST00000513243 MMP19Q99542 508 aa20.87■□□□□ 0.93
DDR1-272ENST00000513243 ZNF236Q9UL36 1845 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 IGHA2P01877 340 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 PDHBP11177 359 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 SLC4A3P48751 1232 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 OAZ1P54368 228 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 CCDC178Q5BJE1 867 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 LSG1Q9H089 658 aaKnown RBP20.86■□□□□ 0.93
DDR1-272ENST00000513243 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
DDR1-272ENST00000513243 RBM8AQ9Y5S9 174 aaKnown RBP20.86■□□□□ 0.93
DDR1-272ENST00000513243 ZNF536O15090 1300 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 FRMPD2Q68DX3 1309 aaPredicted RBP20.85■□□□□ 0.93
DDR1-272ENST00000513243 SNAP25P60880 206 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 KCTD2Q14681 263 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 MFSD14CQ5VZR4 134 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 BTNL9Q6UXG8 535 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
DDR1-272ENST00000513243 GPCPD1Q9NPB8 672 aa20.85■□□□□ 0.93
DDR1-272ENST00000513243 TNKSO95271 1327 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 PGK2P07205 417 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 CYP2C19P33261 490 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 SLC16A2P36021 539 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 ZNF543Q08ER8 600 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 UBAC1Q9BSL1 405 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 CRISPLD2Q9H0B8 497 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 SLC5A4Q9NY91 659 aa20.84■□□□□ 0.93
DDR1-272ENST00000513243 TNRC18O15417 2968 aaPredicted RBP20.83■□□□□ 0.93
DDR1-272ENST00000513243 E7EWF7 191 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 TFRCP02786 760 aaKnown RBP20.83■□□□□ 0.93
DDR1-272ENST00000513243 CCND3P30281 292 aaPredicted RBP20.83■□□□□ 0.93
DDR1-272ENST00000513243 TRDNQ13061 729 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 OLFML2BQ68BL8 750 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 STOX1Q6ZVD7 989 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 PNMA1Q8ND90 353 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 AGBL1Q96MI9 1066 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
DDR1-272ENST00000513243 SEC23AQ15436 765 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 ZNF792Q3KQV3 632 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 SYDE2Q5VT97 1194 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 ERICH6BQ5W0A0 696 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 CCDC174Q6PII3 467 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 UBE2Q1Q7Z7E8 422 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 CHST13Q8NET6 341 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 MAML3Q96JK9 1138 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
DDR1-272ENST00000513243 CDC45O75419 566 aa20.81■□□□□ 0.92
DDR1-272ENST00000513243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms