RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PDLIM7Q9NR12 457 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 ELP1O95163 1332 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 CUL9Q8IWT3 2517 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 TMEM265A0A087WTH1 108 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 IGKV6D-41A0A0C4DH26 115 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 SMIM22K7EJ46 135 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 ERC2O15083 957 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 RAD21O60216 631 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 DUSP11O75319 330 aaKnown RBP14.99□□□□□ -0.01
VEGFA-216ENST00000512683 TTLL1O95922 423 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 NDUFB10O96000 172 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-216ENST00000512683 CLTBP09497 229 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 SNRNP48Q6IEG0 339 aaKnown RBP14.99□□□□□ -0.01
VEGFA-216ENST00000512683 GMCL1P1Q8NEA9 526 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 KLHDC9Q8NEP7 349 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 BADQ92934 168 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 FERMT2Q96AC1 680 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 SLC38A10Q9HBR0 1119 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 PRDM5Q9NQX1 630 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-216ENST00000512683 MTMR4Q9NYA4 1195 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
VEGFA-216ENST00000512683 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 TRIM43BA6NCK2 446 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 DCDC2CA8MYV0 355 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 GPAA1O43292 621 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 ADAMTS4O75173 837 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 CST5P28325 142 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-216ENST00000512683 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
VEGFA-216ENST00000512683 PDE4BQ07343 736 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
VEGFA-216ENST00000512683 NEDD1Q8NHV4 660 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 TRIM43Q96BQ3 446 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-216ENST00000512683 SEMA6BQ9H3T3 888 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 ABHD16BQ9H3Z7 469 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
VEGFA-216ENST00000512683 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 A0A1W2PQ45 241 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-216ENST00000512683 A0A1W2PQY0 241 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 PLA2G6O60733 806 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 SNAI1O95863 264 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-216ENST00000512683 PGK1P00558 417 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 APPP05067 770 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 RAG1P15918 1043 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 TDO2P48775 406 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 ACLYP53396 1101 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 NKX3-2P78367 333 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 TICAM2Q86XR7 235 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 IFNL3Q8IZI9 196 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 CHURC1Q8WUH1 139 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 GUCD1Q96NT3 240 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 SEZ6LQ9BYH1 1024 aa14.97□□□□□ -0.01
VEGFA-216ENST00000512683 A0A0C4DFX4 3053 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 TAL1P17542 331 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-216ENST00000512683 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 TKFCQ3LXA3 575 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 CCSAPQ6IQ19 270 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-216ENST00000512683 FAM160B2Q86V87 743 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 CEP95Q96GE4 821 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 GLT1D1Q96MS3 346 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 TMEM39AQ9NV64 488 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 RIPK3Q9Y572 518 aa14.96□□□□□ -0.01
VEGFA-216ENST00000512683 BMP3P12645 472 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 GJA9P57773 515 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 KCNA10Q16322 511 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 SH3RF1Q7Z6J0 888 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 CPXCR1Q8N123 301 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 KIFC2Q96AC6 838 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 NUP88Q99567 741 aaPredicted RBP14.95□□□□□ -0.02
VEGFA-216ENST00000512683 RLFQ13129 1914 aa14.95□□□□□ -0.02
VEGFA-216ENST00000512683 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-216ENST00000512683 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-216ENST00000512683 TIMP1P01033 207 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 TSPY3P0CV98 308 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 TSPY8P0CW00 308 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 CDK7P50613 346 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 FPGSQ05932 587 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 FAAP100Q0VG06 881 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.94□□□□□ -0.027e-15■■■□□ 17.8
VEGFA-216ENST00000512683 STAG1Q8WVM7 1258 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 CDX2Q99626 313 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-216ENST00000512683 UPF3AQ9H1J1 476 aaKnown RBP14.94□□□□□ -0.02
VEGFA-216ENST00000512683 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-216ENST00000512683 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
VEGFA-216ENST00000512683 SYNRGQ9UMZ2 1314 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 ASB14A6NK59 587 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 PQBP1O60828 265 aaKnown RBP14.93□□□□□ -0.02
VEGFA-216ENST00000512683 CABYRO75952 493 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 STAT2P52630 851 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 TFAP4Q01664 338 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms