RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 LSM14BQ9BX40 385 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 IMPG2Q9BZV3 1241 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 MRPL44Q9H9J2 332 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 HOMER2Q9NSB8 354 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 ARHGEF35A5YM69 484 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 TMEM232C9JQI7 657 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 BACH1O14867 736 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 EXOC3O60645 756 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 VIMP08670 466 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 SCARF1Q14162 830 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 ARHGAP44Q17R89 818 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 CYB5R4Q7L1T6 521 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 GPBP1Q86WP2 473 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 SRPRBQ9Y5M8 271 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 CCDC169A6NNP5 214 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 HGSO14964 777 aaPredicted RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 FLOT1O75955 427 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 HARSP12081 509 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 PPFIA1Q13136 1202 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 USPL1Q5W0Q7 1092 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 MSL1Q68DK7 614 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 DPH6Q7L8W6 267 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 CPXCR1Q8N123 301 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 RPGRIP1Q96KN7 1286 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 CNOT6LQ96LI5 555 aaKnown RBP8.93□□□□□ -0.98
NEK1-208ENST00000512193 ATP8A2Q9NTI2 1148 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 CTTNBP2NLQ9P2B4 639 aa8.93□□□□□ -0.98
NEK1-208ENST00000512193 RPAP1Q9BWH6 1393 aaPredicted RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 KRT5P13647 590 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 BIRC3Q13489 604 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 PLA2G4DQ86XP0 818 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 FBF1Q8TES7 1133 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 USP40Q9NVE5 1235 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 ADGRB3O60242 1522 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 CALUO43852 315 aaPredicted RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 ABCB4P21439 1286 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 INPP5BP32019 993 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 POLR2FP61218 127 aaKnown RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 DMTNQ08495 405 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 SEL1L2Q5TEA6 688 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 FNBP4Q8N3X1 1017 aaPredicted RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 LRRC45Q96CN5 670 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 ZNF804BA4D1E1 1349 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 PLEKHA8P1O95397 391 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 CALRP27797 417 aaKnown RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 ATP1A2P50993 1020 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 DPP8Q6V1X1 898 aaPredicted RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 STMN4Q9H169 189 aaPredicted RBP8.92□□□□□ -0.98
NEK1-208ENST00000512193 GLT8D2Q9H1C3 349 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 PSTPIP2Q9H939 334 aa8.92□□□□□ -0.98
NEK1-208ENST00000512193 KCNK3O14649 394 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 PTPREP23469 700 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 DDIT3P35638 169 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 BTDP43251 543 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 SCNN1DP51172 638 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 LRRC41Q15345 812 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 TPH2Q8IWU9 490 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 U2AF1L4Q8WU68 220 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 ARMCX3Q9UH62 379 aaPredicted RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 HYOU1Q9Y4L1 999 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 PHLPP2Q6ZVD8 1323 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 ACTN4O43707 911 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 CDC27P30260 824 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 TRAPPC10P48553 1259 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 CYP27A1Q02318 531 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 KRT71Q3SY84 523 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 PRR16Q569H4 304 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 CERS3Q8IU89 383 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 MB21D2Q8IYB1 491 aaPredicted RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 TBC1D22AQ8WUA7 517 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 DYNLL2Q96FJ2 89 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 PAGE5Q96GU1 130 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 NT5C3AQ9H0P0 336 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 UTP11Q9Y3A2 253 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 ARHGEF40Q8TER5 1519 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 ZBTB16Q05516 673 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 PPP1R14CQ8TAE6 165 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 NAP1L3Q99457 506 aaPredicted RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 SAMD15Q9P1V8 674 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 LMTK3Q96Q04 1460 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 ATP2A1O14983 1001 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 XRCC5P13010 732 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 TCP1P17987 556 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 CYP4A11Q02928 519 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 IQCGQ9H095 443 aaKnown RBP8.91□□□□□ -0.98
NEK1-208ENST00000512193 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 LAMC1P11047 1609 aa8.91□□□□□ -0.98
NEK1-208ENST00000512193 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms