RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 CHRDL2Q6WN34 429 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 NFXL1Q6ZNB6 911 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 Q6ZUG5 572 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 PNMA1Q8ND90 353 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 LPAR1Q92633 364 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 VCPKMTQ9H867 229 aa22.88■■□□□ 1.25
SMAD1-211ENST00000512019 CCDC69A6NI79 296 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 RAD21O60216 631 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 PEX10O60683 326 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 NEK4P51957 841 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 SGMS1Q86VZ5 419 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 C12orf42Q96LP6 360 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 DEFB118Q96PH6 123 aa22.87■■□□□ 1.25
SMAD1-211ENST00000512019 GCLCP48506 637 aaPredicted RBP22.86■■□□□ 1.25
SMAD1-211ENST00000512019 PABPC4Q13310 644 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMAD1-211ENST00000512019 ANKRD1Q15327 319 aa22.86■■□□□ 1.25
SMAD1-211ENST00000512019 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
SMAD1-211ENST00000512019 AGXT2Q9BYV1 514 aa22.86■■□□□ 1.25
SMAD1-211ENST00000512019 GPHNQ9NQX3 736 aaPredicted RBP22.86■■□□□ 1.25
SMAD1-211ENST00000512019 TRIOBPQ9H2D6 2365 aa22.86■■□□□ 1.25
SMAD1-211ENST00000512019 F5H6K3 240 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 NDUFB10O96000 172 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 KLRC3Q07444 240 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 BRF1Q92994 677 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 HTATIP2Q9BUP3 242 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 ALDH8A1Q9H2A2 487 aaPredicted RBP22.85■■□□□ 1.25
SMAD1-211ENST00000512019 PAK6Q9NQU5 681 aaPredicted RBP22.85■■□□□ 1.25
SMAD1-211ENST00000512019 EMILIN3Q9NT22 766 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 SLC12A7Q9Y666 1083 aa22.85■■□□□ 1.25
SMAD1-211ENST00000512019 WDR46O15213 610 aaKnown RBP22.84■■□□□ 1.25
SMAD1-211ENST00000512019 DDAH1O94760 285 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 VCAM1P19320 739 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 SLFN13Q68D06 897 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 SYNE3Q6ZMZ3 975 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 GMCL1Q96IK5 515 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 SENP2Q9HC62 589 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 GJD2Q9UKL4 321 aa22.84■■□□□ 1.25
SMAD1-211ENST00000512019 ST18O60284 1047 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 TFRCP02786 760 aaKnown RBP22.83■■□□□ 1.25
SMAD1-211ENST00000512019 TRIM32Q13049 653 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 ZNF654Q8IZM8 581 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 SPICE1Q8N0Z3 855 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 DCAF4Q8WV16 495 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 P2RX7Q99572 595 aaKnown RBP22.83■■□□□ 1.25
SMAD1-211ENST00000512019 RBM27Q9P2N5 1060 aaKnown RBP22.83■■□□□ 1.25
SMAD1-211ENST00000512019 MTMR7Q9Y216 660 aa22.83■■□□□ 1.25
SMAD1-211ENST00000512019 CALM1P0DP23 149 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 CALM2P0DP24 149 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 CALM3P0DP25 149 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 SLC1A4P43007 532 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 TOB2Q14106 344 aaPredicted RBP22.82■■□□□ 1.24
SMAD1-211ENST00000512019 CRISPLD2Q9H0B8 497 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.82■■□□□ 1.24
SMAD1-211ENST00000512019 TXNRD2Q9NNW7 524 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 MORF4L1Q9UBU8 362 aa22.82■■□□□ 1.24
SMAD1-211ENST00000512019 KLF18A0A0U1RQI7 1052 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 PDHBP11177 359 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 RCAN1P53805 252 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 AK2P54819 239 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 IRX3P78415 501 aaPredicted RBP22.81■■□□□ 1.24
SMAD1-211ENST00000512019 APOBRQ0VD83 1088 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 CCDC96Q2M329 555 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 KIAA1755Q5JYT7 1200 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 APOA5Q6Q788 366 aa22.81■■□□□ 1.24
SMAD1-211ENST00000512019 DIS3LQ8TF46 1054 aaKnown RBP22.81■■□□□ 1.24
SMAD1-211ENST00000512019 ISY1Q9ULR0 285 aaKnown RBP22.81■■□□□ 1.24
SMAD1-211ENST00000512019 SNHG28P0DPA3 235 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 BMP3P12645 472 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
SMAD1-211ENST00000512019 TROAPQ12815 778 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 MAP3K14Q99558 947 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 TANGO6Q9C0B7 1094 aa22.8■■□□□ 1.24
SMAD1-211ENST00000512019 RPAP3Q9H6T3 665 aaPredicted RBP22.8■■□□□ 1.24
SMAD1-211ENST00000512019 NAP1L2Q9ULW6 460 aaPredicted RBP22.8■■□□□ 1.24
SMAD1-211ENST00000512019 GOLGA8BA8MQT2 603 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 ZBTB43O43298 467 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 HMGCRP04035 888 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 PARP1P09874 1014 aaKnown RBP22.79■■□□□ 1.24
SMAD1-211ENST00000512019 EVCP57679 992 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 HERVK_113P62684 666 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 ASPRV1Q53RT3 343 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 FAM83BQ5T0W9 1011 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 GPATCH4Q5T3I0 446 aaKnown RBP22.79■■□□□ 1.24
SMAD1-211ENST00000512019 MICU3Q86XE3 530 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 PAWRQ96IZ0 340 aaKnown RBP22.79■■□□□ 1.24
SMAD1-211ENST00000512019 NUP88Q99567 741 aaPredicted RBP22.79■■□□□ 1.24
SMAD1-211ENST00000512019 PRO3102Q9H379 93 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 BRPF3Q9ULD4 1205 aa22.79■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L15C9J2P7 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L13C9JLJ4 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L11C9JVI0 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L18D6R9N7 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L22D6RA61 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L17D6RBQ6 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L19D6RCP7 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 USP17L20D6RJB6 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 CYP2B6P20813 491 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 KIF5BP33176 963 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 ZNF543Q08ER8 600 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms