RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ALPK1Q96QP1 1244 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 DSCC1Q9BVC3 393 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 ITGA4P13612 1032 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 CFPP27918 469 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 EGR3Q06889 387 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 NCAPHQ15003 741 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 KCNMB1Q16558 191 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 GNPTABQ3T906 1256 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 C1QL4Q86Z23 238 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 SPPL2CQ8IUH8 684 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 CRACR2BQ8N4Y2 399 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 OXR1Q8N573 874 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 CHST7Q9NS84 486 aa6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 ZNF214Q9UL59 606 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P13-201ENST00000511263 RSF1Q96T23 1441 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 A0A087WZG4 1122 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 LRRN2O75325 713 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 GSNP06396 782 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 ACRP10323 421 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 GDNFP39905 211 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 NOP2P46087 812 aaKnown RBP6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 GAB4Q2WGN9 574 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 HEATR6Q6AI08 1181 aaKnown RBP6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 LCNL1Q6ZST4 164 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 GMLQ99445 158 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 SF3B6Q9Y3B4 125 aaKnown RBP6.43□□□□□ -1.38
HMGB3P13-201ENST00000511263 A0A1W2PQH9 124 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 FAM86C2PA6NEL3 165 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 PPM1BO75688 479 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 CHRNEQ04844 493 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 SF3A1Q15459 793 aaKnown RBP6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 LINC00116Q8NCU8 138 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 ZNF512BQ96KM6 892 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 HDAC8Q9BY41 377 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 PRDM14Q9GZV8 571 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 ACTR10Q9NZ32 417 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 SLAMF8Q9P0V8 285 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 PRKAG3Q9UGI9 489 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 TMEM59LQ9UK28 342 aa6.42□□□□□ -1.38
HMGB3P13-201ENST00000511263 BAZ1AQ9NRL2 1556 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 ESR1P03372 595 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 RAP1GAPP47736 663 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 FXNQ16595 210 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 VHLLQ6RSH7 139 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 RUFY4Q6ZNE9 571 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 PRR23BQ6ZRT6 265 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 BHLHE22Q8NFJ8 381 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 TCTN2Q96GX1 697 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 WHRNQ9P202 907 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 PPP1R1BQ9UD71 204 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 TCFL5Q9UL49 500 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 DIS3Q9Y2L1 958 aaKnown RBP6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 NCAPD3P42695 1498 aa6.41□□□□□ -1.38
HMGB3P13-201ENST00000511263 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 STK10O94804 968 aaKnown RBP6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 PRAMEF1O95521 474 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 TP53P04637 393 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 FGRP09769 529 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 CD247P20963 164 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 POU4F1Q01851 419 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 POMZP3Q6PJE2 187 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 ADAT2Q7Z6V5 191 aaKnown RBP6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 LILRA2Q8N149 483 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 ANKS4BQ8N8V4 417 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 PDZD8Q8NEN9 1154 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 GFOD1Q9NXC2 390 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 PCDHA11Q9Y5I1 949 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 FHOD1Q9Y613 1164 aa6.4□□□□□ -1.38
HMGB3P13-201ENST00000511263 CECR2Q9BXF3 1484 aa6.4□□□□□ -1.39
HMGB3P13-201ENST00000511263 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 U2SURPO15042 1029 aaKnown RBP6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 TSPAN15O95858 294 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 KRT1P04264 644 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 BMP8BP34820 402 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZYXQ15942 572 aaKnown RBP6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 TDRD10Q5VZ19 366 aaKnown RBP6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 CKAP2LQ8IYA6 745 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 LRRC56Q8IYG6 542 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 APBA2Q99767 749 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 HAUS7Q99871 368 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 TANGO6Q9C0B7 1094 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 GP6Q9HCN6 339 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 C19orf73Q9NVV2 129 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZMYM5Q9UJ78 669 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 SUGT1Q9Y2Z0 365 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 MRVI1Q9Y6F6 885 aa6.39□□□□□ -1.39
HMGB3P13-201ENST00000511263 SHISA3A0PJX4 238 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 C9IYK1 514 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 AGRPO00253 132 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 SMAD7O15105 426 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms