RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 IGHMBP2P38935 993 aaKnown RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 CCT6AP40227 531 aaKnown RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 TROAPQ12815 778 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 TUBB8Q3ZCM7 444 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 CCDC152Q4G0S7 254 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 GALNT17Q6IS24 598 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZNF572Q7Z3I7 529 aaPredicted RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 SYNE4Q8N205 404 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZNF507Q8TCN5 953 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 DDX17Q92841 729 aaKnown RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 EIF3CQ99613 913 aaKnown RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 RHOXF2Q9BQY4 288 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZKSCAN3Q9BRR0 538 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZSWIM4Q9H7M6 989 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZNHIT6Q9NWK9 470 aaKnown RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 LRP2BPQ9P2M1 347 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ZNF330Q9Y3S2 320 aaPredicted RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 SAR1BQ9Y6B6 198 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
SNF8-210ENST00000511214 BCL9O00512 1426 aa10.22□□□□□ -0.77
SNF8-210ENST00000511214 ABCA3Q99758 1704 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 A0A1W2PQJ5 194 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 PRPF6O94906 941 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 SRGNP10124 158 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 SCG2P13521 617 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 PRLRP16471 622 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 CYP7A1P22680 504 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 KIF5BP33176 963 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 MAGEA9P43362 315 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 UBXN1Q04323 297 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 ZNF174Q15697 407 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 PFKFB3Q16875 520 aaPredicted RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 COBLL1Q53SF7 1204 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 EARS2Q5JPH6 523 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 AFAP1L1Q8TED9 768 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 CCDC47Q96A33 483 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 PURBQ96QR8 312 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 RIOK1Q9BRS2 568 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 CCSER1Q9C0I3 900 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 VPS16Q9H269 839 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 TAB2Q9NYJ8 693 aa10.21□□□□□ -0.77
SNF8-210ENST00000511214 MAGEC2Q9UBF1 373 aaPredicted RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNF8-210ENST00000511214 REXO2Q9Y3B8 237 aaKnown RBP10.21□□□□□ -0.77
SNF8-210ENST00000511214 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 A0A0U1RQJ8 604 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 TTC26A0AVF1 554 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 BICDL2A1A5D9 508 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 STRCP1A6NGW2 1772 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 PSMA7O14818 248 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 RHOBTB3O94955 611 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 PRPHP41219 470 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 NLRP5P59047 1200 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 ZBED6P86452 979 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 CCDC178Q5BJE1 867 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 GBP6Q6ZN66 633 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 SMYD4Q8IYR2 804 aaPredicted RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 CCDC82Q8N4S0 544 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 MMGT1Q8N4V1 131 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 C4orf32Q8N8J7 132 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 NOA1Q8NC60 698 aaKnown RBP10.2□□□□□ -0.78
SNF8-210ENST00000511214 DAGLBQ8NCG7 672 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 COG1Q8WTW3 980 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 MTRQ99707 1265 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 DISC1Q9NRI5 854 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 HPCAL4Q9UM19 191 aa10.2□□□□□ -0.78
SNF8-210ENST00000511214 MYH2Q9UKX2 1941 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 ITGB4P16144 1822 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 CICQ96RK0 1608 aaPredicted RBP10.19□□□□□ -0.78
SNF8-210ENST00000511214 ABCB11O95342 1321 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 MINDY4BA8MYZ0 360 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 RNF225M0QZC1 329 aaPredicted RBP10.19□□□□□ -0.78
SNF8-210ENST00000511214 RNF40O75150 1001 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 SYF2O95926 243 aaKnown RBP10.19□□□□□ -0.78
SNF8-210ENST00000511214 CPP00450 1065 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 HNRNPH3P31942 346 aaKnown RBP10.19□□□□□ -0.78
SNF8-210ENST00000511214 STAT6P42226 847 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 PRCPP42785 496 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 GNAQP50148 359 aa10.19□□□□□ -0.78
SNF8-210ENST00000511214 GYS2P54840 703 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms