RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 STAMQ92783 540 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF512BQ96KM6 892 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PLEKHF1Q96S99 279 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 MFRPQ9BY79 579 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 AATFQ9NY61 560 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF112Q9UJU3 913 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PDE4DIPQ5VU43 2346 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PTPDC1A2A3K4 754 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 RRN3P2A6NIE6 340 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 GH2P01242 217 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZSCAN20P17040 1043 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 INPP5BP32019 993 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STAT2P52630 851 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ATP8B2P98198 1209 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 AMPD2Q01433 879 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 UBE3CQ15386 1083 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STXBP2Q15833 593 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZYXQ15942 572 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SLFN13Q68D06 897 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 MFSD6Q6ZSS7 791 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CATIPQ7Z7H3 387 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ENGASEQ8NFI3 743 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 BICD2Q8TD16 824 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SPOCK2Q92563 424 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ACSF2Q96CM8 615 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 C12orf42Q96LP6 360 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SPATC1LQ9H0A9 340 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ECHDC1Q9NTX5 307 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CCPG1Q9ULG6 757 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 NAP1L2Q9ULW6 460 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STX8Q9UNK0 236 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 MRPS17Q9Y2R5 130 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PCDHB12Q9Y5F1 795 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STK24Q9Y6E0 443 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ABCB11O95342 1321 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF521Q96K83 1311 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ABHD14A-ACY1A0A1B0GW23 586 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 FAM155AB1AL88 458 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 F6X3S4 739 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PQBP1O60828 265 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 TOP1P11387 765 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ALAS1P13196 640 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PPM1AP35813 382 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CLCN6P51797 869 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CREMQ03060 361 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 LAMC2Q13753 1193 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 GNL2Q13823 731 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 GIT2Q14161 759 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 RIOX2Q8IUF8 465 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PLCD3Q8N3E9 789 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 OR6J1Q8NGC5 347 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 KCNG4Q8TDN1 519 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 NSUN6Q8TEA1 469 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STAG1Q8WVM7 1258 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 JARID2Q92833 1246 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SUCLG2Q96I99 432 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CLMNQ96JQ2 1002 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 FAM167AQ96KS9 214 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ANP32EQ9BTT0 268 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SEMA4AQ9H3S1 761 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PCDHA11Q9Y5I1 949 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SNCAIPQ9Y6H5 919 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SYNGAP1Q96PV0 1343 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 SPDYE3A6NKU9 549 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 TNFRSF10AO00220 468 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 IGF2BP3O00425 579 aaKnown RBP eCLIP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 BAG4O95429 457 aaKnown RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 FOSP01100 380 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 RB1P06400 928 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 BCRP11274 1271 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 TRIM29Q14134 588 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 KRT32Q14532 448 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 PTPAQ15257 358 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 RABL6Q3YEC7 729 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 RRP12Q5JTH9 1297 aaKnown RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 OLFM4Q6UX06 510 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 PPFIBP1Q86W92 1011 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 TRIM22Q8IYM9 498 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 USP38Q8NB14 1042 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 PPM1EQ8WY54 764 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 OSBP2Q969R2 916 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 SHDQ96IW2 340 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 RIPOR3Q96MK2 946 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 SDF4Q9BRK5 362 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 TINF2Q9BSI4 451 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 C11orf84Q9BUA3 381 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC8Q9H0W5 538 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 IL23AQ9NPF7 189 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 CEP131Q9UPN4 1083 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 NR2E1Q9Y466 385 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 ARIH1Q9Y4X5 557 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 MRVI1Q9Y6F6 885 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 AFDNP55196 1824 aaKnown RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 TUBGCP6Q96RT7 1819 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 SCN11AQ9UI33 1791 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 DDX60Q8IY21 1712 aaKnown RBP3.29□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC69A6NI79 296 aa3.29□□□□□ -1.88
CLOCK-209ENST00000511124 CCND2P30279 289 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms