RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 TMED8Q6PL24 325 aaPredicted RBP10.4□□□□□ -0.74
PDPN-209ENST00000510906 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
PDPN-209ENST00000510906 CERS3Q8IU89 383 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 BAP1Q92560 729 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 C1QTNF2Q9BXJ5 285 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 DCTPP1Q9H773 170 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 PAG1Q9NWQ8 432 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 AGTPBP1Q9UPW5 1226 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 DOCK1Q14185 1865 aa10.4□□□□□ -0.75
PDPN-209ENST00000510906 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.75
PDPN-209ENST00000510906 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
PDPN-209ENST00000510906 LZTS3O60299 673 aaPredicted RBP10.39□□□□□ -0.75
PDPN-209ENST00000510906 ASNSP08243 561 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 ADD2P35612 726 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 PSMC4P43686 418 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 HMGCS2P54868 508 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 RNF135Q8IUD6 432 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 LCORLQ8N3X6 602 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 HAUS7Q99871 368 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 ZBTB21Q9ULJ3 1066 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 SLC45A1Q9Y2W3 748 aa10.39□□□□□ -0.75
PDPN-209ENST00000510906 BRCA2P51587 3418 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 BRD1O95696 1058 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 PLCD1P51178 756 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 MAP7D1Q3KQU3 841 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 TSHZ3Q63HK5 1081 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 SMCR8Q8TEV9 937 aaPredicted RBP10.38□□□□□ -0.75
PDPN-209ENST00000510906 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 FOXJ1Q92949 421 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
PDPN-209ENST00000510906 EHD4Q9H223 541 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 ARMT1Q9H993 441 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 AS3MTQ9HBK9 375 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 ECHDC1Q9NTX5 307 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 SERPINB13Q9UIV8 391 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 ZMIZ1Q9ULJ6 1067 aa10.38□□□□□ -0.75
PDPN-209ENST00000510906 ZSWIM8A7E2V4 1837 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 PRKAB2O43741 272 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 MBD4O95243 580 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 GNRH1P01148 92 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 GH2P01242 217 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
PDPN-209ENST00000510906 CYP2D6P10635 497 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDPN-209ENST00000510906 BACE1P56817 501 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 NCOA4Q13772 614 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 SLC9C1Q4G0N8 1177 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 TATDN1Q6P1N9 297 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 ZNF333Q96JL9 665 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 HCSTQ9UBK5 93 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 SRRDQ9UH36 339 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
PDPN-209ENST00000510906 MYCP01106 439 aaPredicted RBP10.36□□□□□ -0.75
PDPN-209ENST00000510906 SHMT1P34896 483 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 PRMT2P55345 433 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 FCGRTP55899 365 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 KCNC4Q03721 635 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 PRKCZQ05513 592 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 GABPAQ06546 454 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
PDPN-209ENST00000510906 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 ANKRD13CQ8N6S4 541 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDPN-209ENST00000510906 ASCC2Q9H1I8 757 aaPredicted RBP10.36□□□□□ -0.75
PDPN-209ENST00000510906 DCP1AQ9NPI6 582 aaPredicted RBP10.36□□□□□ -0.75
PDPN-209ENST00000510906 RANBP2P49792 3224 aaKnown RBP10.36□□□□□ -0.75
PDPN-209ENST00000510906 CDK5RAP2Q96SN8 1893 aa10.36□□□□□ -0.75
PDPN-209ENST00000510906 MYPNQ86TC9 1320 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 HTTP42858 3142 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 C19orf81C9J6K1 198 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 HOXD10P28358 340 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 SH3BP2P78314 561 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 PABPC4Q13310 644 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDPN-209ENST00000510906 UBE3CQ15386 1083 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 ABCB5Q2M3G0 1257 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 CERKLQ49MI3 558 aaPredicted RBP10.35□□□□□ -0.75
PDPN-209ENST00000510906 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 RAET1EQ8TD07 263 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
PDPN-209ENST00000510906 GPATCH3Q96I76 525 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 GABRQQ9UN88 632 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 PTPRFP10586 1907 aa10.35□□□□□ -0.75
PDPN-209ENST00000510906 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms